Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00005 ATGTCTAACGAGGTTTTTCCTTCTCGAGATGCAATGTTAAATTGGGCTCGAGATGTTGCAAAAGAGAATGGATTTGTCCTTATTATTTTGAGATCAGAGACATCTACAAAATCTACAAGAAATACAAGACGTAATCAAAGGAAGACATTTGTAATTTTGGGTTGCGATAGAAGTGGAAAGTATAGAGGACTATACAAGAATGCATTATCCCAAAAGGTAAATAATACTAGAAAATGTGAGTGTCCCTTCAGGCTAAGGGGAAAAGCTTTGAAAAAGGCTGAAGGATGGACTATTAAGGTAATGTGTGGTTGTCACAATCATGAATTGGAGGAAACATTGGTGGGTCATCCATATGCAGGCCGGTTGAGTGCTGAAGAGAAGTCTTTGGTTGATGATATGACAAAGAACATGATGAAGCCAAAAGATATACTGTTGACATTGAAAGATTATAATATGGATAATGTAACTACCATCAAGCAGATTTACAATGCTCGACATGCTTATCGATCCTCTCAAAAAGGTTTAGAAATGCAATACCTACTGAAATTATTGGAACGTGAGCGGTATGTGTACTGGTATAGAAAGGTGGATGATTCCAATGTTATCAGAGATATATTCTGGACACATCCAGATGCCATTAAACTTCTGGGTGCTTTCAACACTGTCTTGATAATTGATAGTATTTATACAACCACTAGGTATCCATTGCCACTGCTTGAGATTGTTGGTGTTACTTCAACTGAGTTAACGTTCTCTGTGGCTTTTGCTTTTGTGGAGTCTGAGCTAGCTGACAACTTCACTTGGGCACTACAGAAGTTAAGAGGATTGATTGTTAAAGATGAAGACATACCTCAGGTGATTGTGACTAACAGAGACATTTCTTTGATGAATGCAGTGCAAGTTGTCTTTCCGAGCTCTTCTAATTTGTTATGTCGGTTTCATATCAACAAGAACGTGAAGTCCAAATGCATCTCGATAATCCATCCAAAGGAGAAACAGGACTTGGTGATGAATGCATGGGATTTTGTTGTGAATTCTTCTAATGAAAGGGAGTATATGCAGCGTCTGGCATTATTTGAAAAAGTTTGCTCAGGTTTTTCTAATTTTAGTGAATATGTGAAAAATATGTGGCTGATTCCATACAAGGAAAAGTTTGTCACTTCCTGGACAAATCAGGTGATGCATTTGGGTAACACAACGACGAATAGGGTTGAGGAAACAAATTGTAAGTTAAAGAATTTGCTTCAAGATAGCAAGGAAGATATGTGTAGTTATTGGGATGCTATGAATGACATGATTACTTTGCAACACACAGAGATTAAGTCGTCATTTGAGAAAAGCATAAATGTAGTGGATCATATGCATAATACTCCATTATACATCAAACTGCAAGGACTTGTATCAAGGAGTGCATTGAGTCATATAGCTGACGAGTATGACCGAGTTAGGGATGTTGGTACTGATAGTTCTAAATGTTGTTGCATAGTTAGAACTACACATTGTCTTCCTTGTGCATGTGAACTTGCTAAGTACAATACAACGGGTCATCCTATTCCCTTGGAGGCAATTCACGTTCACTGGAAGAAGTTAAACTTTATTGACCGAGGAATAAATGATGAGGAGTTTGAGTTATCGTTGCAACCTGAATTGGATGCTTTGCTCAAGAGATTTCAGGAACTTGATTGTGCTGGGAAATTAATTCTAAAGGCTAAATTGCATGAACTAGCATTTCCTGATACAACTTCAAAGTGTCCAACTCCCACAGTGGTAAGAATAAAGGGTGCGACAGGGTCAAAAAGAGACAGATCAATTCATTCTGATATTTCACAACGGGAGCATGTTGACGCAATGCGTCCTACCCATAGTGGCACTTCATCTTGCCCTTCATCTCATCAACTAGTCCATGATTCTAAACGAAGAAGAGTTCTGTCAATGATGGACCAATTTCCGATTCAGATCCATCCATTTATTGAAGAAATTATCGATGTGAAAGCAGATTCAAATTGTGGTTATCGTGCTGTTGCAGCTCAACTTGGTATGGGTGAGGAATCATGGGCTTTAGTTCGTCAGGATTTGATTAGAGAGCTTCAACAGTGGCAAGATATTTACACCAAACTCTTTGGTAGCAATGATCGAGTGGCTGAACTGAGGCAATCTTTGTATGTTGACAAGGAGACATCTACTAAAAAGTGGATGACCATACCAGATATGGGTTATGTAATTGCCTCAAGATACAATGTGGTTCTAGTTGCTTTATCCTTGAGGGAGTCCATGACATTTTTCCCTCTTAGAGGACGACCACCACTATCTGAGTCAAGGCACCGACTTATTGCTATTGGGTTGGTGCATGATTGTCACTTTGTACAGGTTGCTTTGAAGGCCGAGTCTGCATTACCTCCCACTGCCTTGCAGTGGTCGAGATACTGCAGTGCTGAATCTCGTTCTTGGGAAACTTCATATGTTAATCGTATGGAACATTTTAGGTCATTGTTTCCTCAAAAAAGAAATGATTGTGTAAACGTTATTGGGGACTAA 2535 0.3897 MSNEVFPSRDAMLNWARDVAKENGFVLIILRSETSTKSTRNTRRNQRKTFVILGCDRSGKYRGLYKNALSQKVNNTRKCECPFRLRGKALKKAEGWTIKVMCGCHNHELEETLVGHPYAGRLSAEEKSLVDDMTKNMMKPKDILLTLKDYNMDNVTTIKQIYNARHAYRSSQKGLEMQYLLKLLERERYVYWYRKVDDSNVIRDIFWTHPDAIKLLGAFNTVLIIDSIYTTTRYPLPLLEIVGVTSTELTFSVAFAFVESELADNFTWALQKLRGLIVKDEDIPQVIVTNRDISLMNAVQVVFPSSSNLLCRFHINKNVKSKCISIIHPKEKQDLVMNAWDFVVNSSNEREYMQRLALFEKVCSGFSNFSEYVKNMWLIPYKEKFVTSWTNQVMHLGNTTTNRVEETNCKLKNLLQDSKEDMCSYWDAMNDMITLQHTEIKSSFEKSINVVDHMHNTPLYIKLQGLVSRSALSHIADEYDRVRDVGTDSSKCCCIVRTTHCLPCACELAKYNTTGHPIPLEAIHVHWKKLNFIDRGINDEEFELSLQPELDALLKRFQELDCAGKLILKAKLHELAFPDTTSKCPTPTVVRIKGATGSKRDRSIHSDISQREHVDAMRPTHSGTSSCPSSHQLVHDSKRRRVLSMMDQFPIQIHPFIEEIIDVKADSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDIYTKLFGSNDRVAELRQSLYVDKETSTKKWMTIPDMGYVIASRYNVVLVALSLRESMTFFPLRGRPPLSESRHRLIAIGLVHDCHFVQVALKAESALPPTALQWSRYCSAESRSWETSYVNRMEHFRSLFPQKRNDCVNVIGD 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00005 844 Pfam MULE transposase domain 222 318 IPR018289 -
Viun10g00005 844 ProSiteProfiles OTU domain profile. 658 793 IPR003323 -
Viun10g00005 844 CDD OTU 659 787 - -
Viun10g00005 844 PANTHER SWIM-TYPE DOMAIN-CONTAINING PROTEIN 3 419 - -
Viun10g00005 844 MobiDBLite consensus disorder prediction 612 631 - -
Viun10g00005 844 Pfam Transcription factor AFT 9 109 IPR014842 GO:0000981|GO:0036086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00005 Viun-Chr10 79512 88838 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun10g00005 AFT 0.00022 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00005 - - gmx:100805365 1323.53