Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00004 ATGTCTAACGAGGTGAATAAGCAAATTGTTGAGGCAACAAATAAGTCTGTTGATTGTAGTGATGCATTTAACACTACAGAGGTTTTTCCTTCTCGAGATGCAATGTTAAATTGGGCTCGAGATGTTGCAAAAGAGAATGGATTTGTCCTTATTATTTTGAGATCAGAGACATCTACAAAATCTACAAGAAATACAAGACGTAATCAAAGGAAGACATTTGTAATTTTGGGTTGCGATAGAAGTGGAAAGTATAGAGGACTATACAAGAATGCATTATCCCAAAAGGTAAATAATACTAGAAAATGTGAGTGTCCCTTCAGGCTAAGGGGAAAAGCTTTGAAAAAGGCTGAAGGATGGACTATTAAGGTAATGTGTGGTTGTCACAATCATGAATTGGAGGAAACATTGGTGGGTCATCCATATGCAGGCCGGTTGAGTGCTGAAGAGAAGTCTTTGGTTGATGATATGACAAAGAACATGATGAAGCCAAAAGATATACTGTTGACATTGAAAGATTATAATATGGATAATGTAACTACCATCAAGCAGATTTACAATGCTCGACATGCTTATCGATCCTCTCAAAAAGGTTTAGAAATGCAATACCTACTGAAATTATTGGAACGTGAGCGGTATGTGTACTGGTATAGAAAGGTGGATGATTCCAATGTTATCAGAGATATATTCTGGACACATCCAGATGCCATTAAACTTCTGGGTGCTTTCAACACTGTCTTGATAATTGATAGTATTTATACAACCACTAGGTATCCATTGCCACTGCTTGAGATTGTTGGTGTTACTTCAACTGAGTTAACGTTCTCTGTGGCTTTTGCTTTTGTGGAGTCTGAGCTAGCTGACAACTTCACTTGGGCACTACAGAAGTTAAGAGGATTGATTGTTAAAGATGAAGACATACCTCAGGTGATTGTGACTAACAGAGACATTTCTTTGATGAATGCAGTGCAAGTTGTCTTTCCGAGCTCTTCTAATTTGTTATGTCGGTTTCATATCAACAAGAACGTGAAGTCCAAATGCATCTCGATAATCCATCCAAAGGAGAAACAGGACTTGGTGATGAATGCATGGGATTTTGTTGTGAATTCTTCTAATGAAAGGGAGTATATGCAGCGTCTGGCATTATTTGAAAAAGTTTGCTCAGGTTTTTCTAATTTTAGTGAATATGTGAAAAATATGTGGCTGATTCCATACAAGGAAAAGTTTGTCACTTCCTGGACAAATCAGGTGATGCATTTGGGTAACACAACGACGAATAGGGTTGAGGAAACAAATTGTAAGTTAAAGAATTTGCTTCAAGATAGCAAGGAAGATATGTGTAGTTATTGGGATGCTATGAATGACATGATTACTTTGCAACACACAGAGATTAAGTCGTCATTTGAGAAAAGCATAAATGTAGTGGATCATATGCATAATACTCCATTATACATCAAACTGCAAGGACTTGTATCAAGGAGTGCATTGAGTCATATAGCTGACGAGTATGACCGAGTTAGGGATGTTGGTACTGATAGTTCTAAATGTTGTTGCATAGTTAGAACTACACATTGTCTTCCTTGTGCATGTGAACTTGCTAAGTACAATACAACGGGTCATCCTATTCCCTTGGAGGCAATTCACGTTCACTGGAAGAAGTTAAACTTTATTGACCGAGGAATAAATGATGAGGAGTTTGAGTTATCGTTGCAACCTGAATTGGATGCTTTGCTCAAGAGATTTCAGGAACTTGATTGTGCTGGGAAATTAATTCTAAAGGCTAAATTGCATGAACTAGCATTTCCTGATACAACTTCAAAGTGTCCAACTCCCACAGTGGTAAGAATAAAGGGTGCGACAGGGTCAAAAAGAGACAGATCAATTCATTCTGATATTTCACAACGGGAGCATGTTGACGCAATGCGTCCTACCCATAGTGGCACTTCATCTTGCCCTTCATCTCATCAACTAGTCCATGATTCTAAACGAAGAAGAGTTCTGTCAATGATGGACCAATTTCCGATTCAGATCCATCCATTTATTGAAGAAATTATCGATGTGAAAGCAGATTCAAATTGTGGTTATCGTGCTGTTGCAGCTCAACTTGGTATGGGTGAGGAATCATGGGCTTTAGTTCGTCAGGATTTGATTAGAGAGCTTCAACAGTGGCAAGATATTTACACCAAACTCTTTGGTAGCAATGATCGAGTGGCTGAACTGAGGCAATCTTTGTATGTTGACAAGGAGACATCTACTAAAAAGTGGATGACCATACCAGATATGGGTTATGTAATTGCCTCAAGATACAATGTGGTTCTAGTTGCTTTATCCTTGAGGGAGTCCATGACATTTTTCCCTCTTAGAGGACGACCACCACTATCTGAGTCAAGGCACCGACTTATTGCTATTGGGTTGGTGCATGATTGTCACTTTGTACAGGTTGCTTTGAAGGCCGAGTCTGCATTACCTCCCACTGCCTTGCAGTGGTCGAGATACTGCAGTGCTGAATCTCGTTCTTGGGAAACTTCATATGTTAATCGTATGGAACATTTTAGGTCATTGTTTCCTCAAAAAAGAAATGATTGTGTAAACGTTATTGGGGACTAA 2604 0.3886 MSNEVNKQIVEATNKSVDCSDAFNTTEVFPSRDAMLNWARDVAKENGFVLIILRSETSTKSTRNTRRNQRKTFVILGCDRSGKYRGLYKNALSQKVNNTRKCECPFRLRGKALKKAEGWTIKVMCGCHNHELEETLVGHPYAGRLSAEEKSLVDDMTKNMMKPKDILLTLKDYNMDNVTTIKQIYNARHAYRSSQKGLEMQYLLKLLERERYVYWYRKVDDSNVIRDIFWTHPDAIKLLGAFNTVLIIDSIYTTTRYPLPLLEIVGVTSTELTFSVAFAFVESELADNFTWALQKLRGLIVKDEDIPQVIVTNRDISLMNAVQVVFPSSSNLLCRFHINKNVKSKCISIIHPKEKQDLVMNAWDFVVNSSNEREYMQRLALFEKVCSGFSNFSEYVKNMWLIPYKEKFVTSWTNQVMHLGNTTTNRVEETNCKLKNLLQDSKEDMCSYWDAMNDMITLQHTEIKSSFEKSINVVDHMHNTPLYIKLQGLVSRSALSHIADEYDRVRDVGTDSSKCCCIVRTTHCLPCACELAKYNTTGHPIPLEAIHVHWKKLNFIDRGINDEEFELSLQPELDALLKRFQELDCAGKLILKAKLHELAFPDTTSKCPTPTVVRIKGATGSKRDRSIHSDISQREHVDAMRPTHSGTSSCPSSHQLVHDSKRRRVLSMMDQFPIQIHPFIEEIIDVKADSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDIYTKLFGSNDRVAELRQSLYVDKETSTKKWMTIPDMGYVIASRYNVVLVALSLRESMTFFPLRGRPPLSESRHRLIAIGLVHDCHFVQVALKAESALPPTALQWSRYCSAESRSWETSYVNRMEHFRSLFPQKRNDCVNVIGD 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00004 867 Pfam MULE transposase domain 245 341 IPR018289 -
Viun10g00004 867 ProSiteProfiles OTU domain profile. 681 816 IPR003323 -
Viun10g00004 867 CDD OTU 682 810 - -
Viun10g00004 867 MobiDBLite consensus disorder prediction 635 654 - -
Viun10g00004 867 PANTHER SWIM-TYPE DOMAIN-CONTAINING PROTEIN 26 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00004 Viun-Chr10 77797 88838 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun10g00004 MULE 5.5e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00004 - - gmx:100805365 1354.35