Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9g00005 ATGTTACAGGACTATGTGCGGACAGGAACCTATCATGCTGCTGTTATTGAGAACCGGTCTGATTTCGCTGGTCGTGTTGTAGTTGATGTGGGTGCTGGTAGTGGTATTTTATCACTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGAAATCCAATGCTAGCTCAACGAATTACAGTGATCAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATATCTGAGCCCATGGGAACCTTGTTAATCAATGAAAGAATGTTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTTGTTCCTACGGGAAAAATGTTTCCAGCTCTGGGAAGGATTCACATGGCACCTTTCACTGATGAATATTTGTTTATAGAAATTGCTAATAAGGCACTGTTTTGGCAGCAACAGAACTATTATGGTGTTGATTTAACACCCCTGCATGGGACTGCATTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGACTGTTAATAGCTCCTTCAATATCCCATGTGATAGACTTCACCAAAATAAAGGAGGAAGAACTGTATGAAATTGATATTCCTCTGAGATTCATAGCCTCTGTGGGCACCAGAGTTCATGGCTTAGCTTGTTGGTTTGATGTGCTGTTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCTCCTGGGTCACCGACAACCCATTGGTACCAGTTACGTTGTGTTCTCTCACAGCCAATATACGTCATGGCTGGACAAGAAATTACTGGCAGGCTTCACTTGATTGCCCACAATGCACAGAGTTATACAATTTATTTAACATTGTCAGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGGGGAATTCTCCAAACATCTTCCTGTAAACTTGATCTGAAAGAACCCTATTATAGAATGTCTCAACCACAGGCTTATGCATTAGCTCAAGATCAACAATCTCAACCACTTATATCAACGCAGTCACCCTGA 1050 0.4229 MLQDYVRTGTYHAAVIENRSDFAGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPMLAQRITVIKGKVEDVELPEKADILISEPMGTLLINERMLESYVIARDRFLVPTGKMFPALGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPSISHVIDFTKIKEEELYEIDIPLRFIASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYALAQDQQSQPLISTQSP 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9g00005 349 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 302 IPR029063 -
Vium9g00005 349 CDD AdoMet_MTases 27 98 - -
Vium9g00005 349 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 311 IPR025799 GO:0016274|GO:0018216
Vium9g00005 349 FunFam Probable histone-arginine methyltransferase CARM1 1 128 - -
Vium9g00005 349 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 1 296 IPR025799 GO:0016274|GO:0018216
Vium9g00005 349 FunFam Probable histone-arginine methyltransferase CARM1 130 338 - -
Vium9g00005 349 Pfam Ribosomal protein L11 methyltransferase (PrmA) 23 97 - -
Vium9g00005 349 Gene3D - 130 338 - -
Vium9g00005 349 Gene3D Vaccinia Virus protein VP39 1 128 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9g00005 Vium-Chr9 28143 32866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9g00005 1 278 C2H2 Transcription Factor Family AT3G12270 34.122 5.42e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9g00005 K05931 - gmx:100780736 681.019