Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9g00003 ATGTTACAGGACTATGTGCGGACAGGAACCTATCATGCTGCTGTTATTGAGAACCGGTCTGATTTCGCTGGTCGTGTTGTAGTTGATGTGGGTGCTGGTAGTGGTATTTTATCACTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGAAATCCAATGCTAGCTCAACGAATTACAGTGATCAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATATCTGAGCCCATGGGAACCTTGTTAATCAATGAAAGAATGTTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTTGTTCCTACGGGAAAAATGTTTCCAGCTCTGGGAAGGATTCACATGGCACCTTTCACTGATGAATATTTGTTTATAGAAATTGCTAATAAGGCACTGTTTTGGCAGCAACAGAACTATTATGGTGTTGATTTAACACCCCTGCATGGGACTGCATTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGACTGTTAATAGCTCCTTCAATATCCCATGTGATAGACTTCACCAAAATAAAGGAGGAAGAACTGTATGAAATTGATATTCCTCTGAGATTCATAGCCTCTGTGGGCACCAGAGTTCATGGCTTAGCTTGTTGGTTTGATGTGCTGTTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCTCCTGGGTCACCGACAACCCATTGGTACCAGTTACGTTGTGTTCTCTCACAGCCAATATACGTCATGGCTGGACAAGAAATTACTGGCAGGCTTCACTTGATTGCCCACAATGCACAGAGTTATACAATTTATTTAACATTGTCAGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGGGGAATTCTCCAAACATCTTCCTGTAAACTTGATCTGAAAGAACCCTATTATAGAATGTCTCAACCACAGGCTTATGCATTAGCTCAAGATCAACAATCTCAACCACTTATATCAACGCAGGATATACATATTCAATCTCAGGATTTAGATGAACCTGAATTTGTACAACAGCCTTCGCCTAATTCATGTGTCCAGATTGATCCACTGATGCAGAATATTTGA 1143 0.4164 MLQDYVRTGTYHAAVIENRSDFAGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPMLAQRITVIKGKVEDVELPEKADILISEPMGTLLINERMLESYVIARDRFLVPTGKMFPALGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPSISHVIDFTKIKEEELYEIDIPLRFIASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYALAQDQQSQPLISTQDIHIQSQDLDEPEFVQQPSPNSCVQIDPLMQNI 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9g00003 380 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 311 IPR025799 GO:0016274|GO:0018216
Vium9g00003 380 Gene3D - 130 338 - -
Vium9g00003 380 Pfam Ribosomal protein L11 methyltransferase (PrmA) 23 97 - -
Vium9g00003 380 CDD AdoMet_MTases 27 98 - -
Vium9g00003 380 FunFam Probable histone-arginine methyltransferase CARM1 1 128 - -
Vium9g00003 380 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 1 296 IPR025799 GO:0016274|GO:0018216
Vium9g00003 380 FunFam Probable histone-arginine methyltransferase CARM1 130 338 - -
Vium9g00003 380 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 302 IPR029063 -
Vium9g00003 380 Gene3D Vaccinia Virus protein VP39 1 128 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9g00003 Vium-Chr9 27946 32870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9g00003 1 278 C2H2 Transcription Factor Family AT3G12270 34.122 6.28e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9g00003 K05931 - gmx:100780736 737.643