Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9984g00003 ATGGCGACAATTAAACTTCATGGAAGCCCCTTCTCAACAGCCACCATGCGAGCTACTGCTTCCCTGTACGAGAAGGAGGTTGAATTTGAGTTTGTTCACGTTGACATGAAAAATGGTGAACACAAAAAGGAACCCTTCATTTTGCTCAACCCATTTGGGCAAGTTCCAGCGTTCGAAGATGGAGATTTGAAGCTCTTTGAATCAAGGGCAATAACTCAATATATTGTTCATGAGTATGCTGATAAGGGGACCCAACTGATATGCAACGACTCGAAGAAGATGGCAATAGTGAGAATGTGGATGGAAATAGAGAGCCAAAAGTACGATCAAGCAGCTTCAAAACTTGTATGGGAGGTTGCAGTAAAGCCAATGTATGGGATTCCTACGGATCCAGCGGCTGTAGAAGAGACAGAAGGGAAACTAGGTACTATTCTTGATTTCTACGAGAAAACACTGTCTCAAAACAAATACTTAGCAGGTGAGTGTTTCACCTTGGCGGATCTGCATCACCTTCCCACCCTTCATTACTTGATGAACACACCGAGCAAGAAGTTGTTTGAATCACGACCACATGTTACTGCATGGATTGCTGATATTACAGCAAGACCAGCTTGGTCTAAGGTTCTTGCCATGCAGCCCAATCTAAGCAGTAAATAG 657 0.4353 MATIKLHGSPFSTATMRATASLYEKEVEFEFVHVDMKNGEHKKEPFILLNPFGQVPAFEDGDLKLFESRAITQYIVHEYADKGTQLICNDSKKMAIVRMWMEIESQKYDQAASKLVWEVAVKPMYGIPTDPAAVEETEGKLGTILDFYEKTLSQNKYLAGECFTLADLHHLPTLHYLMNTPSKKLFESRPHVTAWIADITARPAWSKVLAMQPNLSSK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9984g00003 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 218 IPR010987 -
Vium9984g00003 218 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 211 - -
Vium9984g00003 218 CDD GST_N_Phi 3 77 - -
Vium9984g00003 218 CDD GST_C_Phi 92 209 IPR034347 -
Vium9984g00003 218 FunFam Glutathione S-transferase F2 89 209 - -
Vium9984g00003 218 Pfam Glutathione S-transferase, C-terminal domain 112 203 IPR004046 -
Vium9984g00003 218 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Vium9984g00003 218 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Vium9984g00003 218 SUPERFAMILY GST C-terminal domain-like 85 208 IPR036282 -
Vium9984g00003 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Vium9984g00003 218 SFLD Glutathione Transferase (cytosolic) 1 212 IPR040079 -
Vium9984g00003 218 SFLD Main.5: Phi-like 1 212 - -
Vium9984g00003 218 Gene3D - 89 214 - -
Vium9984g00003 218 FunFam Glutathione S-transferase F2 3 87 - -
Vium9984g00003 218 Gene3D Glutaredoxin 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9984g00003 Vium-Chr9984 84546 85882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9984g00003 1 209 Glutathione S-transferase Gene Family AT1G02930 61.244 1.76e-95 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9984g00003 K00799 - gmx:100799868 386.726