Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium996g00001 ATGTGTGCACATGCTGGAATGATAGGTACTAGTAGGCCTACACATTATCATGTTCTGTTAGATGAGATTGGGTTTTCAGCTGATGATCTGCAGGAACTTGTGTACTCATTATCATACGTGTATCAGAGGAGCACCACTGCCATATCTGTTGTTGCTCCAATCTGCTATGCTCGCTTGGCTGCTTCTCAGATGGGGCAGTTTATGAAATTTGAGGAAAGATCGGAGACAGCTTCTAGTCATAGTGGTGCTCCCCCTGTCCCTCAGTTGCCTATATTGAATGATAATGTTTCTAGCTCTATGTTCTTTTGCTGA 312 0.4359 MCAHAGMIGTSRPTHYHVLLDEIGFSADDLQELVYSLSYVYQRSTTAISVVAPICYARLAASQMGQFMKFEERSETASSHSGAPPVPQLPILNDNVSSSMFFC 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium996g00001 103 Gene3D - 1 103 IPR036397 GO:0003676
Vium996g00001 103 ProSiteProfiles Piwi domain profile. 1 69 IPR003165 GO:0003676
Vium996g00001 103 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 71 - -
Vium996g00001 103 SUPERFAMILY Ribonuclease H-like 1 67 IPR012337 -
Vium996g00001 103 Pfam Piwi domain 1 69 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium996g00001 Vium-Chr996 7 839 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium996g00001 1 103 Eukaryotic Initiation Factors Gene Family AT5G43810 41.441 9.49e-23 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium996g00001 K11593 - gmx:100792105 185.652