Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9955g00011 ATGGAAGGTGGTTCAATGTGGCTACTCTATGTTTTTGGTGCTCTTCTTGTCCTAAGATTTCTGCTGAGAAATGTAAACTGGTTTCTCTATGAACAGAAACTGGGTGAAAAACAATACTTTCTTCCCCCTGGTCATATGGGGTGGCCCTTAATCGGCAACATGTGGTCCTTCTTTAGTGCTTTAAAGACCAATAACCCTGAGTCCTTCATGGACTCCTTTTACACCAGATATGGAAAAACTGGGATATACAAGGCATTGATGTTTGGAAATCCAAGTGTGATAGTCACAACACCGGAAGCATGCAAAAGGGTGTTGACAGATGATGGCAAATTCACTGTTGGATGGCCTCGTGCCACAGTAGAGTTGATGGGAAAAAAGTCTTTCATTTCAATATCCTACGAAGAACACAAACACCTTAGACGTCTAACATCTGCTTCCATCAATGGCTATGAAGCACTATCCGTTTACATTACATATATTGAAGAAGCTGTGATAAGTTCATTGGAGAAATGGACCACCATGGGAGATATTGAGTTTTTGACTGAACTGCGAAAGCTTACTTTCAACATCATTACACATATTTTTCTTGGTGAAGGAAAAGAAGATGCACATGCTATGGAGATTTTAGAAAAAGAATTTACTGCAGTTAATTATGGACTTAGAGCTATGCCAGTTAACCTTCCTGGATTTGGATTTTATACAGCACTTAAGGCAAGAAAAAATCTGGTGGCCATATTTCATCCTGTTGTGGATAAACGAATAAAAGAAAGGAAGGAAAAGTTTCCCAGAAAAAAGGCCAAAGATATGATGAATGCTTTGATAGATGTTGAAGATGAAAATGGAAAGAAATTGAGTGTTGATGACATCACTGATATCTTGTTGATGTACTTGAATGCTGGTCATGAATCATCAGGACATATTACCATGTGGGCAACCTATTTCCTCCAAACTCATCCACAATACTTCAAGAAGGCTAAGGAAGAACAAGAACAAATTCTAAAGAAAAGGCCTCCAACGCAGAAAGGGTTGTCATTAGCAGAAGTTCGGAAGATGGAATATCTATCCAAGGTGATTGATGAAACACTGCGACTGATCTCATTCTCACTTACGGTCTTTCGGGAGGCAAAATCTGATGTCAATATCAATGGTTACTTGGTTCCAAAGGGTTGGAAAGTAATGGTCTGGTTCAGGTCTGTTCACCTTGATCCCGAGATATATCCTAATCCAAAAGAGTTTAATCCTGAGAGATGGAATGAATTGCACAAGGCTGGAGAATTTCTTCCGTTTGGAGCAGGAAGCAGATTTTGCCCCGGAAATGACCTTGCCAAACTGGAAATCTCAGTTTTCCTGCATCATTTTCTGCTGAATTACGAGCTTGAACGCCTTAATCCACTTGCCCCTATGAGATTCCTTCCTCACCCAAGACCCATTGACAACTGCATGGCAAGGATCAACAAAGCGAAGTAA 1467 0.4022 MEGGSMWLLYVFGALLVLRFLLRNVNWFLYEQKLGEKQYFLPPGHMGWPLIGNMWSFFSALKTNNPESFMDSFYTRYGKTGIYKALMFGNPSVIVTTPEACKRVLTDDGKFTVGWPRATVELMGKKSFISISYEEHKHLRRLTSASINGYEALSVYITYIEEAVISSLEKWTTMGDIEFLTELRKLTFNIITHIFLGEGKEDAHAMEILEKEFTAVNYGLRAMPVNLPGFGFYTALKARKNLVAIFHPVVDKRIKERKEKFPRKKAKDMMNALIDVEDENGKKLSVDDITDILLMYLNAGHESSGHITMWATYFLQTHPQYFKKAKEEQEQILKKRPPTQKGLSLAEVRKMEYLSKVIDETLRLISFSLTVFREAKSDVNINGYLVPKGWKVMVWFRSVHLDPEIYPNPKEFNPERWNELHKAGEFLPFGAGSRFCPGNDLAKLEISVFLHHFLLNYELERLNPLAPMRFLPHPRPIDNCMARINKAK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9955g00011 488 CDD CYP90-like 76 486 - -
Vium9955g00011 488 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9955g00011 488 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9955g00011 488 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9955g00011 488 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9955g00011 488 FunFam Ent-kaurenoic acid oxidase 32 487 - -
Vium9955g00011 488 PANTHER CYTOCHROME P450 26 37 474 - -
Vium9955g00011 488 Gene3D Cytochrome P450 31 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9955g00011 488 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9955g00011 488 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9955g00011 488 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9955g00011 488 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9955g00011 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Vium9955g00011 488 Pfam Cytochrome P450 42 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9955g00011 488 SUPERFAMILY Cytochrome P450 41 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9955g00011 Vium-Chr9955 83929 89049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9955g00011 6 487 Cytochrome P450 AT2G32440 62.526 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9955g00011 K04123 - gmx:100781238 722.235