Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9951g00002 ATGACCACAACCACAAGGCATAGTTACAAACTCTCTCTCAAAAGAGCCACAAAGAGAACAAGAACAACAAGAAGAAGGAGAAGAAGCCACCCACTTAGCCAAAACCTCATCACCACAATTGACCCCTCCAACCATGAAAAGTGCCACAAAAATTCCCAGAAACTGTCACAAAAGCTTGAGGCTTTGAAGAACCTCATTCCCACAACGAACACCGAAGAAGAGGCTGTGAAACCAGACCAGCTGTTCAAGGAAACCGCAGATTACATCGTGTTGCTGCGGACACGTGTGGTGGTGCTGCAGAAACTCATTGAGTATTATGGGAACAACAGCACCCAGAACGATGAACATGCTCTGTTGTTATAG 363 0.4573 MTTTTRHSYKLSLKRATKRTRTTRRRRRSHPLSQNLITTIDPSNHEKCHKNSQKLSQKLEALKNLIPTTNTEEEAVKPDQLFKETADYIVLLRTRVVVLQKLIEYYGNNSTQNDEHALLL 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9951g00002 120 MobiDBLite consensus disorder prediction 11 31 - -
Vium9951g00002 120 CDD bHLH_AtIBH1_like 46 103 IPR044549 GO:0006355
Vium9951g00002 120 MobiDBLite consensus disorder prediction 1 33 - -
Vium9951g00002 120 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 106 IPR044660 GO:0006355
Vium9951g00002 120 Coils Coil 45 65 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9951g00002 24 104 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 31.707 2.22e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9951g00002 - - gmx:102659957 125.946