Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vium991g00016 | ATGGAAGCAGCAGCGCTTGCTGGAGTAGCTGTCTTTCTATTACTTAGTTACTTCATCAAATGGGCTACAGCAGGTTCTGCTCGCAAGAAGCCACCGGAAGCAGCCGGTGGCTGGCCTTTAATCGGCCACCTTCGCCTCTTTGGTCGCTCCGCCGGTCAGCCTCTATACGAAACGCTAGGAGGCTTAGCAGACAAGTATGGCCCAATATTCAGCATCCGAATCGGTGTGCATCAGGCGGTAGTGGTGAGCTCTTGGGAGTTAGCGAAGGAGTGTTTTACCACTCTGGACGTTGTTGTCTCATCTCGTCCCAAATTCAGCGCCGCCAAAATCTTGACATACGACTATGCTAGTTTTGCGTTTTCCCCTTACGGAGAATTCTGGCGCGACATGCATAAGATTACGGTTTCGGAGCTATTTTCTACCCGACGTGCTGAACAGCTTCGAGGAATTAGATATTCGGAGGTGCAGAGTTCGTTGAAAGAACTATACGGAACGTGGGTGGAGAAAAAGGGTGATTTGTTGGTGGAGATGAAGGAGTGGTTCGGGAACATGAATCTGAACGTGATTCTGAGGACGGTTGCGGGAAAGCGATACTGTGTGGGGAATGGAGATGAGGAACGGATGAGGGTTCGGATGGTACTGAGAGAATTCTTTAATTTGATGGGGGTGGTTGTGATTGGGGATGCGATTCCATTTCTTGGTTGGCTTGATTTGGGAGGTGAAGTGAAGGAGATGAGGAAAACGGCTGTAGAAATGGATAGCTTCTTTTCTGAATGGTTAGAAGAACATCGCCAACGAAGAGACTCAGATGGGAAGAAAAGAGAGGAAGACTTCATTGATGTGTTGCTGTCTGCTCTTGACGGGGTCTACCTTGCTGGTCACGATGCCGACACTGTCATTAAAGCCACATGTCTGACATTAATAGCTGCAGCAACGGATACTACAACAGTTACTATGACTTGGGCATTATCGGTATTGTTGAATAATCGCGATGCCTTGAAGAAAGTTCAAGATGAATTGGATGAGCATGTGGGGATGGAAAAAGCGGTGAATGAATCTGACATAAACAAATTAGTTTACCTTCAAGCTGTCGTTAAAGAGTCAATGAGATTGTATGCAGCTGCACCACTACCTGGTCCGCGTGAATTCACAAGCGATTGTACTTTAGGTGGCTACCATATCCAAGCAGGTACGAGATTGATTTTGAACATTTGGAAGATGCAGAGAGATCCACGTGTATGGGAAAATCCATTGGAGTTTGAGCCAGAAAGGTTCCTCACAAGCCACAAGGGTGTGGATGTGAAGGGTCAACATTTTGAGCTACTTCCCTTTGGTGGCGGAAGAAGGTCGTGCCCTGGCATGTCATTTGCCCTTCAAATGACACACTTAGCTTTAGCAGCTTTTTTGCAAGCATTTAAGGTCACAACACTGAACAATGAACCAGTTGACATGAGTCCCGTATTTGGACTCACATTCATCAAAGCCACCCCGCTTCAGGTTTTAATCCAACCTCGTTTACCACATCAACGTCTCCTTAATAATGTATACTAA | 1551 | 0.4655 | MEAAALAGVAVFLLLSYFIKWATAGSARKKPPEAAGGWPLIGHLRLFGRSAGQPLYETLGGLADKYGPIFSIRIGVHQAVVVSSWELAKECFTTLDVVVSSRPKFSAAKILTYDYASFAFSPYGEFWRDMHKITVSELFSTRRAEQLRGIRYSEVQSSLKELYGTWVEKKGDLLVEMKEWFGNMNLNVILRTVAGKRYCVGNGDEERMRVRMVLREFFNLMGVVVIGDAIPFLGWLDLGGEVKEMRKTAVEMDSFFSEWLEEHRQRRDSDGKKREEDFIDVLLSALDGVYLAGHDADTVIKATCLTLIAAATDTTTVTMTWALSVLLNNRDALKKVQDELDEHVGMEKAVNESDINKLVYLQAVVKESMRLYAAAPLPGPREFTSDCTLGGYHIQAGTRLILNIWKMQRDPRVWENPLEFEPERFLTSHKGVDVKGQHFELLPFGGGRRSCPGMSFALQMTHLALAAFLQAFKVTTLNNEPVDMSPVFGLTFIKATPLQVLIQPRLPHQRLLNNVY | 516 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vium991g00016 | 516 | FunFam | Cytochrome P450 82C4 | 22 | 503 | - | - | |
| Vium991g00016 | 516 | Pfam | Cytochrome P450 | 36 | 486 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | CDD | CYP82 | 67 | 505 | - | - | |
| Vium991g00016 | 516 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | PRINTS | E-class P450 group I signature | 87 | 108 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | PRINTS | E-class P450 group I signature | 184 | 202 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | SUPERFAMILY | Cytochrome P450 | 37 | 505 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | Gene3D | Cytochrome P450 | 25 | 512 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | PRINTS | P450 superfamily signature | 451 | 462 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vium991g00016 | 516 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506|GO:0016705 | |
| Vium991g00016 | 516 | PANTHER | CYTOCHROME P450 82C3-RELATED | 11 | 508 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vium991g00016 | Vium-Chr991 | 134676 | 136518 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vium991g00016 | 32 | 509 | Cytochrome P450 | AT4G31940 | 50.000 | 1.67e-176 | 505 |