Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium991g00015 ATGGATCTTACGATTCAATATCTGGTCGCAGCAGTTACAGCCGTACTCTTCATTTCTTTCCTCATCAAAAGGGGTACACCAGGTTCCACCCGCAAGCCACCGGAAGCAGCCGGTGGGTGGCCTTTGATCGGTCATCTTCACCTCTTGGGTGGTTCCACTGAGCCTCCTCACGTAACCTTAGGATCCTTAGCAGACAAGTATGGCCCAATATTCAGCATCCGAATTGGTGTGCATCCAGCTGTGGTGGTGAGCTCTTGGGAGTTAGCCAAGGAGTGTTTCACCACTCTCGACGTCGTTGTCTCTTCTCGCCCAAAATACACCGCCGCTAAACTCTTGGGCTACAACTATGCTAACTTTGGGTTTTCCCCTTACGGAGAATTCTGGCGTGAGATGCGCAAGATTACGGCTTCAGAATTGCTCTCCACCACCCGCTTCGAACTTCTTAAGGATATTAGACACTCCGAGGTGAAGAGCTCCTTCAAAGAATTGTACAGATCATGGGCGGACAAAGGAGATGGGTCACATTATTTGTCGGTGGAGATGAAGCAGTGGTTCGGAGACGTCAATCTCAACGTCATTCTGCGGATGATTTCGGGAAAGCAATACTCTACCAGAAGTGAAGACGAGCAACAGGTGCGGCGGATTCGGAAGGTTTTCAGAGAGTTCTTCCGTTTGACAGGGTTGTTTGTGGTTGGAGACGCCATTCCGTTTCTGGGGTGGCTTGATTTGGGAGGTGAAGTAAAGGAGATGAAAAAAACGGCCATGGAAATGGATACCATAGTTTCTGAATGGTTAGAAGAACATCGCCAGAAAAGAGACATTGATGAGAGCAAAACAGAGCAGGACTTCGTTGATGTTTTGTTGTCGGTCCTTAAAGGAGTCGACCTTGCCGGTTACGATGTCGACACTGTCATAAAAGCCACCTGCACGATGCTGATTGCCGGAGCAACTGATACCACAGCAGTTACCATGACATGGGCGCTGTCGTTGTTGCTAAATAATCGGGACGCATTGAAGAAAGTACAAGATGAATTGGATGAGCACGTGGGAAAAGAAAGATTAGTGAATGAATCGGATATAAACAAATTAGTTTATCTTCAAGCTGTGGTTAAAGAGACACTGCGATTGTATCCATCTGGGCCATTCTCTGGTCCACGCGAATTCACAGAAAATTGTACACTGGGTGGCTTCAACATCAAAGCGGGTACCCGATTTATATTGAACATTTGGAAATTACACAGAGATCCACGAATATGGTCAAATCCATTGGAGTTTGAACCAGAAAGGTTCTTGAGCAGCCACAAAAGTGTCGATCTGAAGGGTCAGCATTTTGAACTGCTTCCCTTTGGTGGTGGAAGGAGGTTGTGCCCTGGCATATCATTTGGCCTTCAAATGACACACTTGGCATTAGCTTCTCTTTTGCAGGCATTTGAAATCACCACACCATCCAATGCTCAAGTTGATATGAGTGCCACGTTTGGACTCACAAATATGAAAACCACCCCTCTGCAGGTTTTAGTCAGACCCGCTTTATCACATCACCTACTCTTTGGTGATCATGTTTAG 1566 0.4668 MDLTIQYLVAAVTAVLFISFLIKRGTPGSTRKPPEAAGGWPLIGHLHLLGGSTEPPHVTLGSLADKYGPIFSIRIGVHPAVVVSSWELAKECFTTLDVVVSSRPKYTAAKLLGYNYANFGFSPYGEFWREMRKITASELLSTTRFELLKDIRHSEVKSSFKELYRSWADKGDGSHYLSVEMKQWFGDVNLNVILRMISGKQYSTRSEDEQQVRRIRKVFREFFRLTGLFVVGDAIPFLGWLDLGGEVKEMKKTAMEMDTIVSEWLEEHRQKRDIDESKTEQDFVDVLLSVLKGVDLAGYDVDTVIKATCTMLIAGATDTTAVTMTWALSLLLNNRDALKKVQDELDEHVGKERLVNESDINKLVYLQAVVKETLRLYPSGPFSGPREFTENCTLGGFNIKAGTRFILNIWKLHRDPRIWSNPLEFEPERFLSSHKSVDLKGQHFELLPFGGGRRLCPGISFGLQMTHLALASLLQAFEITTPSNAQVDMSATFGLTNMKTTPLQVLVRPALSHHLLFGDHV 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium991g00015 521 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00015 521 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00015 521 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00015 521 Gene3D Cytochrome P450 21 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00015 521 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00015 521 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00015 521 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00015 521 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00015 521 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00015 521 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00015 521 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00015 521 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00015 521 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00015 521 FunFam Cytochrome P450 82C4 23 508 - -
Vium991g00015 521 PANTHER CYTOCHROME P450 82C3-RELATED 12 514 - -
Vium991g00015 521 SUPERFAMILY Cytochrome P450 39 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00015 521 Pfam Cytochrome P450 38 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00015 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Vium991g00015 521 CDD CYP82 68 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium991g00015 Vium-Chr991 130047 133189 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium991g00015 1 516 Cytochrome P450 AT4G31940 48.000 3.84e-180 514