Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium991g00012 ATGTTGAGAAGGCGCAGAACCGGCACAGGTGAAACTAGAGAAGCACCGCCAGAAGTAAGTGGTGCCTGGCCATTGATTGGGCATCTTCACCTTCTAAGTGGGTCAAAAGCACCTCACATCACGTTGGGAAACATGGCAGACAAATATGGACCCATCTTCACCTTGCGCCTTGGTGTTCACAGAAACCTTATTGTGAGCAATTGGGAAATGGCCCAACAGTGTTTTACCGTTAACGACAAAGCGTTTGCTAACCGTCCTAAAACTTTAGCCTTTGAAGTATTGGGCTACAACTTTTCCATGGTGGGGTTCAGCCCCTACTGTTCTTATTGGCGTCACATACGAAAGATTCTCACGCAGGAGCTCCTCTCCACGCAAAGGGTTGACGAGCTCAAGCACGTGATGGAATCAGAGCTGAAGGTAACTATGAAAGAAAATTACGATATTTGGCAAAAGAGGAAAATTAATGGTTCCGAAAAAGCAACAACTGAGATGAAGAGATGGTTCGGGGACATAACGTTAAACATCGTGTTCAGAGCGATGGTAGGAAAACGTTTTGTTGGTGAAAATGATAGTGAGAACGAACGGATCCAAAAGATACTGAATGACTACATTCATCTGGCTGGGTCATTCACCGTGTCTGATGCCTTGCCATATTTGAGATGGTTGGATTTGGATGGAGAAGAACAGAAAATGAAGAAGACGATAAAAGAGTTAGATGGGTTGGCTCAAGTTTGGCTGGAACAACACAAAAGCAACAGGAAAAGTGATTCGGGTAACGGGGATTTCATGGACGTGCTTCTTAGGCTTGTTGAGGAGGGTGAAGAGTTTGAAGGTCGTGACGCCGACATCACAATCAAAGCGACAGTCCTGGGCTTAATATTGGCTGCGACAGACACTAGTACGGGAACATTGACTTGGGCTCTGGCGTTACTCGTGAACAACCCTGAAATCTTAAACAAGGCAACTGAAGAATTGGACAGAGAAATTGGAATGGGGAAAATGGTAGATATATCAGATTTGAAGAAGTTAGAGTACATGCAGTGTATCATAACGGAAAGCCTGCGTTTGTATCCACCTGCACCCCTTAATTTGATACACGAGTCCATGGAAGAGTGCAGCGTGGGTGGATATCACGTGGCAAAAGGCACACGTCTGTTGACTAATATTTCAAAACTTCAACGAGATCCCTTCATATATCCTCATCCATCGGAGTTTCGTCCAGAGAGATTCTTAACAACACACAAGGACGTCGACATGAAGGGTCAACATTTTGAACTCATTCCATTTGGTGCCGGTAGAAGAATGTGTCCTGGTTTGTATTTCGGTTTTCAGGTAATGCAGTTAACACTTGCAACTCTGTTGCATGTATTTCACATCGCAACTCCTGATGGAAAACCTGTCGACATGCTCGAACGAGTTGGACTAACCAACATCAAGGCTTCTCCTCTTCAACTCATTCTTACACCACGTCTCTCCTCCCATATTTATCATCAAATTTAA 1500 0.444 MLRRRRTGTGETREAPPEVSGAWPLIGHLHLLSGSKAPHITLGNMADKYGPIFTLRLGVHRNLIVSNWEMAQQCFTVNDKAFANRPKTLAFEVLGYNFSMVGFSPYCSYWRHIRKILTQELLSTQRVDELKHVMESELKVTMKENYDIWQKRKINGSEKATTEMKRWFGDITLNIVFRAMVGKRFVGENDSENERIQKILNDYIHLAGSFTVSDALPYLRWLDLDGEEQKMKKTIKELDGLAQVWLEQHKSNRKSDSGNGDFMDVLLRLVEEGEEFEGRDADITIKATVLGLILAATDTSTGTLTWALALLVNNPEILNKATEELDREIGMGKMVDISDLKKLEYMQCIITESLRLYPPAPLNLIHESMEECSVGGYHVAKGTRLLTNISKLQRDPFIYPHPSEFRPERFLTTHKDVDMKGQHFELIPFGAGRRMCPGLYFGFQVMQLTLATLLHVFHIATPDGKPVDMLERVGLTNIKASPLQLILTPRLSSHIYHQI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium991g00012 499 CDD CYP82 50 490 - -
Vium991g00012 499 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00012 499 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00012 499 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00012 499 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00012 499 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00012 499 PRINTS E-class P450 group I signature 70 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00012 499 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00012 499 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00012 499 PRINTS E-class P450 group I signature 46 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00012 499 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00012 499 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00012 499 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00012 499 Pfam Cytochrome P450 19 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00012 499 FunFam Cytochrome P450 82C4 6 488 - -
Vium991g00012 499 PANTHER CYTOCHROME P450 82C3-RELATED 9 496 - -
Vium991g00012 499 Coils Coil 224 244 - -
Vium991g00012 499 SUPERFAMILY Cytochrome P450 17 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00012 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Vium991g00012 499 Gene3D Cytochrome P450 2 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium991g00012 Vium-Chr991 90202 92098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium991g00012 17 496 Cytochrome P450 AT4G31940 46.856 2.23e-161 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium991g00012 - - pvu:PHAVU_009G061400g 789.645