Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium991g00011 ATGTTCAACAACATGTTGTACCACGAAAACTCTCTCGCCAAGAACACAATACCACTTACCATCTCATTATTCTGCCTGTTGTTATTTCTCTTTATTCTTTCGTCCATTTCTAGAAAGCTCAAAAACCAGATAGCTGCAACAAGAAAAGCACCGCCAGAAGTAAGTGGCGCATGGCCTTTGATTGGTCACCTCCACCTCTTACGGGGGTCCAAACCGCCACAAGATACGTTGGGCAGCATGGCGGACAAATACGGTCCCATCTTCTCCTTGCGTCTGGGAGCTCACAAAACGCTGGTTGTGAGCGATTGGGAAATGGCCAAACAGTGCTTTACCGTCAACGACAGAGTGTTCGCTAACCGTCCAAAGTCTATGAGTTTTGAAGTGTTGGGCTACAACTCCTCCTTGATTGGGTTCATCCCTTACGGTTCTTACTGGCGTCAGATGCGTAAAATCTCCATGCTGGAGCTCCTCTGTTCTCGCCGCATAGACACGCTGAAGCCCGTGATGGAAGCCGAAGTGAAAGCAGCGATGAGAGAGAGTTATAATTTGTGGTTGAAGAAGAAAAACGGCTTTTCCGAAATGAATAGGTGGTTTGGGAACATAGCCTTGGACATTATGTTCCAAACTGTGGTAGGAAAACGTTTTTTTAGTGACGGCGACGTGAACGAAGAGAACGAAGGGCTCCGAAAAGCATTCAGGGAGTTGTTTGATCTGAGCAGTTCACTCGCTGTGTCTGATTGTCTGCCCTATTTGAGATGGTTGGATTTGGATGGTAAAGAGAAAAAAATGAAGAGAACGGCGAAAGAGATAGATGGGTTTATCCAGATTTGGCTTGAAGAACACAAACGCAACCGAGATTGTGGTTCAGGTGAACGGAAACAGAGCCAGGACCTGATGGACGTGCTTCTTGGACTTGTTGAAGAGGGTGAAGAGTTTGATGGTAATGACTCTGACACCACAATCAAAGCTATGTGCCTGTCTTTAATTATGGCTGGTTCAGATACCACAACAAGAACATTGGCATGGGCTCTGTCTTTACTTCTCAATAATCGTGAAATTCTACAAGAAGCCATTAAAGAATTAGATACAGAAATTGGAAGTAGAAGGATGGTAGAGGTATCAGATTTGAAGAAACTGAAGTATCTTGAATCTATTATCAAGGAAACACTACGTTTATATCCACCTGCACCGCTTAATTTGCCACACGAGTCCATGGAAAATTGCACAGTGGGTGGGTATGATGTAGCATCCGGCACACGTCTTTTGACTAATCTTTCAAAACTTCAGAGAGATCCATCTTTATATCCAAATCCCCTTGAATTTTGTCCAGAAAGATTCTTAACAACACACAAGGAAGTGGACGTGAAGGGTCAACATTTTGAGTTGATTCCATTCGGTGCAGGTAGAAGAATGTGTCCTGGGATATCTTTCGGTCTCCAAGCGATGCAACTCACACTTGCTACCTTATTGCATGGGTTTGATGTTGAAACTAATGATGGAGGACCTGTTGATATGGTTGGAGACTCTCCCCTCCAAGTCATTCTTTCTCCGCGTCTAAGTTCTCATATTTATGATCAAATATAA 1584 0.4388 MFNNMLYHENSLAKNTIPLTISLFCLLLFLFILSSISRKLKNQIAATRKAPPEVSGAWPLIGHLHLLRGSKPPQDTLGSMADKYGPIFSLRLGAHKTLVVSDWEMAKQCFTVNDRVFANRPKSMSFEVLGYNSSLIGFIPYGSYWRQMRKISMLELLCSRRIDTLKPVMEAEVKAAMRESYNLWLKKKNGFSEMNRWFGNIALDIMFQTVVGKRFFSDGDVNEENEGLRKAFRELFDLSSSLAVSDCLPYLRWLDLDGKEKKMKRTAKEIDGFIQIWLEEHKRNRDCGSGERKQSQDLMDVLLGLVEEGEEFDGNDSDTTIKAMCLSLIMAGSDTTTRTLAWALSLLLNNREILQEAIKELDTEIGSRRMVEVSDLKKLKYLESIIKETLRLYPPAPLNLPHESMENCTVGGYDVASGTRLLTNLSKLQRDPSLYPNPLEFCPERFLTTHKEVDVKGQHFELIPFGAGRRMCPGISFGLQAMQLTLATLLHGFDVETNDGGPVDMVGDSPLQVILSPRLSSHIYDQI 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium991g00011 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Vium991g00011 527 Pfam Cytochrome P450 54 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00011 527 SUPERFAMILY Cytochrome P450 52 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00011 527 Gene3D Cytochrome P450 35 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00011 527 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00011 527 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00011 527 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00011 527 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00011 527 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00011 527 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00011 527 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00011 527 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00011 527 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00011 527 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00011 527 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00011 527 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00011 527 PANTHER CYTOCHROME P450 82C3-RELATED 28 524 - -
Vium991g00011 527 Coils Coil 344 364 - -
Vium991g00011 527 FunFam Cytochrome P450 82C4 41 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium991g00011 Vium-Chr991 79307 81394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium991g00011 19 524 Cytochrome P450 AT4G31970 44.656 2.11e-155 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium991g00011 - - gmx:100787630 725.317