Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium991g00008 ATGGCATCAAGTTTAACGGTATCTCCTCTATTGGTGCACCTACGATCCTCCTCATGCAAGTGGAAGACCTCTTCCTCCGTGCGTCCTTTTACAACCAAAGCTTCAGTCTCTGAAACGACGTCGTTACCAGCGTCGGAAACGGCCAAGCTCCCGCTGCGCGAAATCCCGGGAGACTACGGTCTCCCTTTCATAGGACCCATCAGCGACCGCCTCGATTTTTTCTACAACCAAGGCCGTGACGTTTTCTTCCAATCCCGCGTCCAGAAGTACAACTCCACCGTCTTTCGCGTCAACATGCCACCTGGCCCCTTCATCAGCTCCGACCCAAAAGTCATCGTTTTGCTTGATGCCAAAAGCTTCCCCGTCCTCTTCGACGTGACAAAAGTAGAAAAACGTGACCTCTTCACCGGCACCTACATGCCTTCCCTCGAACTAACCGGCGGTTACCGAATCCTCTCCTACCTCGACCCCTCCGAACCTAAACACGACAAACTAAAACGCCTCCTCTTCTTCCTTCTCAAACACCGAAGCAGTCACGTCATTCCCGAGTTCCATTCAACCTACACAACCCTCTTCGAAACCCTCGAGAAAGAGCTGGCAGACAAAGGAAAAGCTGCTTTTCAAGACCCCAGTGACCAAGCAGCGTTTAACTTCCTGGCTCGCGCGCTTTTTGGCGCCAACCCCTCCGACACAAAACTCGGAAGCGACGGCCCAGGTATAATCCAAATATGGGTTCTGCTCCAGCTTGGCCCTATTTTGACATTGGGCCTTCCCAAATTCATTGAAGATCCCATCCTCCACACCTTCCCCATCCCTCCTTTTCTGATAAAGAGCGACTACCAGAGGCTCTACGATTTCTTCTACGAGTCCGCTGGGGCTGTATTTGACGAAGCGTCGCGTCTTGGTATCTCCAAAGAAGAAGCGTGCCACAACCTGTTATTCGCCACGTGCTTTAACTCGTTTGGCGGAATGAAAATTTTATTCCCCAGCATGCTGAAGTGGATTGCAGGTGCGGGCTTGAAACTTCAAGCTCAGCTGGCGGAGGAGGTGAGGGCCGCCGTTAAGGCTAACGGCGGGAAGGTGACGATGGCGGCGTTGGAAGCGATGCCGCTGGTGAAGTCGGTGGTGTACGAGGCGTTTCGCATTGAACCGCCGGTGCCACTGCAGTACGGGAGGGCGAAGAGGGACTTGGTGATCGAGAGTCACGACAATTCGTTTTCGGTGAAGAAAGGGGAGATGCTGTTTGGGTTTCAGCCGTTTGCGACTAAGGATCCGAAGATATTTGAGAATGCAGAGAAGTACGTGGCTGATAGGTTCGTGGGGGAGGGAGAGAAGCTGCTGAAATACGTGCTCTGGTCGAACGGTCCTGAGACCGAAAACCCCAGCCTTGGAAACAAACAGTGTGCTGGGAAGGATTTTGTGGTACTGTTTTCTCGGCTTCTGGTTGTGGAGCTATTTCTTCGTTATGATTCTTTTGAAGTTGGGGTTGGAACCTCGCCGTTGGGTGCTTCCCTTAACATAACCTCCCTCAAGAAAGCAACCTCTTAG 1548 0.5233 MASSLTVSPLLVHLRSSSCKWKTSSSVRPFTTKASVSETTSLPASETAKLPLREIPGDYGLPFIGPISDRLDFFYNQGRDVFFQSRVQKYNSTVFRVNMPPGPFISSDPKVIVLLDAKSFPVLFDVTKVEKRDLFTGTYMPSLELTGGYRILSYLDPSEPKHDKLKRLLFFLLKHRSSHVIPEFHSTYTTLFETLEKELADKGKAAFQDPSDQAAFNFLARALFGANPSDTKLGSDGPGIIQIWVLLQLGPILTLGLPKFIEDPILHTFPIPPFLIKSDYQRLYDFFYESAGAVFDEASRLGISKEEACHNLLFATCFNSFGGMKILFPSMLKWIAGAGLKLQAQLAEEVRAAVKANGGKVTMAALEAMPLVKSVVYEAFRIEPPVPLQYGRAKRDLVIESHDNSFSVKKGEMLFGFQPFATKDPKIFENAEKYVADRFVGEGEKLLKYVLWSNGPETENPSLGNKQCAGKDFVVLFSRLLVVELFLRYDSFEVGVGTSPLGASLNITSLKKATS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium991g00008 515 Pfam Cytochrome P450 342 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00008 515 SUPERFAMILY Cytochrome P450 51 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00008 515 CDD CYP74 84 508 - -
Vium991g00008 515 Gene3D Cytochrome P450 46 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00008 515 PRINTS E-class P450 group IV signature 369 385 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00008 515 PRINTS E-class P450 group IV signature 422 440 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00008 515 PRINTS E-class P450 group IV signature 468 486 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium991g00008 515 FunFam Allene oxide synthase, chloroplastic 50 515 - -
Vium991g00008 515 PANTHER CYTOCHROME P450 26 50 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium991g00008 Vium-Chr991 57134 58923 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium991g00008 1 514 Cytochrome P450 AT5G42650 63.724 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium991g00008 K01723 - gmx:100807192 815.453