Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9813g00001 ATGTATTCCTCAAAGCTCTATACTACTCTTGTCTTAGTTTCTTTAAGCCTATTTTTCCACCAAACATCATTTGGAGACCCTCTTTTCTATTTCTGTTCAAAGTCTGGGAACTTCACGGCTAATAGTCCCTATGAAACACAGTTGAAAACACTCGTCATCAAGCTCATTTACAAGACCTATTCAACAGGGTTTGCAATGAGCTCAGTGGGCTATAACGTAAACTCAAAGCCATACGGACTTGCTCTTTGTCGTGGCGATGTGTCATCCTCAGAATGCAAAACTTGTGTCGATGATGCAACCGAAGCGATCCTTAGTCGTTGTCCATACAACAAAGGTGGCATCATATGGTACGACAACTGCATGTTCAAGTACTCAGACACCGAATTTTTTGGTACCATTGATAACACAAACATATTTTATATGTGGAACAGGAACCGCGTGACGGATCCAACAACATTTAACTTAAAGACAATAGAATTTCTTAGCGAGATTTCTAAGAAAGCTTGGGTGAACAATCCTAAGTTGTATGCAAGTGGAGAACAAAAGCTTGAGAACTCAGACACACTCTATGGGATGGCTCAGTGCACCAGAGACCTATCTAGCTATGACTGCAAGAAGTGTCTTGCTGATGCAATTAACGACTTTCCGCATTGTTGTGCTGGACAAAAGGGAGCCAGACTTGTAGGTGGGAGCTGTAACTTCAGATATGAGTTATACCCCTTTCTCAAACAATAA 735 0.4122 MYSSKLYTTLVLVSLSLFFHQTSFGDPLFYFCSKSGNFTANSPYETQLKTLVIKLIYKTYSTGFAMSSVGYNVNSKPYGLALCRGDVSSSECKTCVDDATEAILSRCPYNKGGIIWYDNCMFKYSDTEFFGTIDNTNIFYMWNRNRVTDPTTFNLKTIEFLSEISKKAWVNNPKLYASGEQKLENSDTLYGMAQCTRDLSSYDCKKCLADAINDFPHCCAGQKGARLVGGSCNFRYELYPFLKQ 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9813g00001 244 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Vium9813g00001 244 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 10 243 - -
Vium9813g00001 244 Gene3D - 26 129 IPR038408 -
Vium9813g00001 244 Gene3D - 134 241 IPR038408 -
Vium9813g00001 244 Pfam Salt stress response/antifungal 147 239 IPR002902 -
Vium9813g00001 244 Pfam Salt stress response/antifungal 32 126 IPR002902 -
Vium9813g00001 244 ProSiteProfiles Gnk2-homologous domain profile. 135 241 IPR002902 -
Vium9813g00001 244 FunFam Cysteine-rich receptor-like protein kinase 10 137 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9813g00001 Vium-Chr9813 10366 11100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9813g00001 28 243 Pollen Coat Proteome AT4G20670 38.667 1.02e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9813g00001 - - gmx:100527155 337.035