Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9812g00004 ATGGGTAATCTTTCAAGTCCCAACAGAATATTGGCGTTTCTCTTCCTCACATTGGTCCAAATCCAAAGCAAGGTGTTTTGCTACCAATACAAAGTTGGAGATCTTGATGCTTGGGGCATACCCACCTCAACAAATCCACAAGTCTACAAAAAATGGTCCACATATCACAATCTCACAATTGGAGATTCCCTCCTGTTTCTATACCCACCAAGCCAAGATTCAGTGATTCAAGTTACTGAAGAATCCTACAACAGGTGCAACATCAAAGACCCTATCTTGTACATGAACAATGGAAACTCTTTGTTTAACATTACATCGAAGGGCCAATTCTACTTCACTAGTGGTGTGGCTGGCCATTGCCAAAAGAATCAGAAGCTTCATATAGCTGTAGGTGAAGGAATATCAGAAAATGTGGATGCTGCATCTTCTCCTGCATCTGCACCCTCTTATCCCACAGTATTTGGCAATATTCCAGTAGCTGCTTCTACCTCAACCCCAACCTCAACCTCATCTCAACTCACTTCAACTTTTCAACTTCTCATCGTTGGATTTCTGATATCTGCACTCTTTTCTACCCTATGTGATGCCAAAATGCCTTTACCTTTACCATTACAGGCTTAA 621 0.4155 MGNLSSPNRILAFLFLTLVQIQSKVFCYQYKVGDLDAWGIPTSTNPQVYKKWSTYHNLTIGDSLLFLYPPSQDSVIQVTEESYNRCNIKDPILYMNNGNSLFNITSKGQFYFTSGVAGHCQKNQKLHIAVGEGISENVDAASSPASAPSYPTVFGNIPVAASTSTPTSTSSQLTSTFQLLIVGFLISALFSTLCDAKMPLPLPLQA 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9812g00004 206 SUPERFAMILY Cupredoxins 27 130 IPR008972 -
Vium9812g00004 206 PANTHER BLUE COPPER PROTEIN 26 156 IPR039391 GO:0009055
Vium9812g00004 206 Gene3D - 28 142 IPR008972 -
Vium9812g00004 206 FunFam Early nodulin-like protein 1 27 134 - -
Vium9812g00004 206 Pfam Plastocyanin-like domain 45 123 IPR003245 GO:0009055
Vium9812g00004 206 CDD OsENODL1_like 28 130 IPR041846 -
Vium9812g00004 206 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9812g00004 Vium-Chr9812 54628 55767 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9812g00004 14 159 Phytocyanin Superfamily AT1G64640 55.782 1.98e-50 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9812g00004 - - gmx:100527517 300.056