Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium979g00001 ATGAACGAGGCAGTGAATTACATAAAGCACATGCAGAACAATATCAAAGAGCTTGTTGCCAAGAGAGATGAACTGAAGAAACTTTCCAGCCACAGCAATATGGAAAATAGTCATGAGGGTTTGCATACATCTTGCAACTTTACTGTCCACGAGAGTAATGATGTCATAGGAATCGAAATCACCAGTGGCTTCATTGAGGAAAGGCCTAAAGTTTCAAAGTTACTGCAGCTACTGATTCAAGAAGGTCTTGAAGTTGTTAGTTGCCTTTCATCCGAAGTCAATGGTAGATTGCTCCACAGTGTGCAGTGTGAGGTAAACAGTTCCAACTGTTTAGATCTATCTGAGCTGAGAAGGAAAATTTCCAAAGCATTTCCAGCATTTAGATGTTCTGACTAA 396 0.4015 MNEAVNYIKHMQNNIKELVAKRDELKKLSSHSNMENSHEGLHTSCNFTVHESNDVIGIEITSGFIEERPKVSKLLQLLIQEGLEVVSCLSSEVNGRLLHSVQCEVNSSNCLDLSELRRKISKAFPAFRCSD 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium979g00001 131 Coils Coil 1 28 - -
Vium979g00001 131 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium979g00001 Vium-Chr979 7 1027 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium979g00001 1 120 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 37.984 1.06e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium979g00001 - - vum:124824435 262.307