Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9799g00001 ATGGGTGTTGTGATTCCTAGGAACACTACTATTCCTATAAAGAAGGAAACAGTTATTTATACAGTCGAAGATGACCAATATTCAGTCAGGCTTCCGGTTTGTGAGGGCGAGAGAGTAAAAGCAAGTGATAATAATTTGTTGGGTTCTTTTAGTATTTCTGGCTTACCCCCAGCTCCTCGTGGCTATCCTTTTGACGTGACTTTTACAATAAATGAAAATGGCATTCTTTCTGTTTCTGCGGAGGATAAAGTAACCGGTAATAGGAATGAAATTATAATATCCAATGACAAAGGAAGACTATCAAATGCAGAAATTAGTAAAATGATTAAGGAAGCAGAGGATTATAAGTCTGAAGATGAGAAGTTTCTTAAGAAGGCCAAAGCAATGAATGATTTAGATTTTCATGTTTATAAGATCAGAAAGGCTTTAAAGAAAGAAGAAATCAGCTCAAAGTTGAGCTCGAAAGAAAAGCAAGATATCATGTCTAAAATTTCTAGAGCCACTGATATGCTTGATAGTCAGAACGAGATGGAAGATATAGTTGCTATTGAAGACTTTCTGAAAGATCTTAAAGTAATCAGTGAACGAATTATTATGGTCATGGAGAAGATTGTGTAG 618 0.3528 MGVVIPRNTTIPIKKETVIYTVEDDQYSVRLPVCEGERVKASDNNLLGSFSISGLPPAPRGYPFDVTFTINENGILSVSAEDKVTGNRNEIIISNDKGRLSNAEISKMIKEAEDYKSEDEKFLKKAKAMNDLDFHVYKIRKALKKEEISSKLSSKEKQDIMSKISRATDMLDSQNEMEDIVAIEDFLKDLKVISERIIMVMEKIV 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9799g00001 205 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 2 133 IPR029047 -
Vium9799g00001 205 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 128 IPR029047 -
Vium9799g00001 205 Gene3D - 129 203 IPR029048 -
Vium9799g00001 205 PANTHER HEAT SHOCK PROTEIN 70KDA 1 157 IPR013126 GO:0005524|GO:0140662
Vium9799g00001 205 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 128 199 IPR029048 -
Vium9799g00001 205 Pfam Hsp70 protein 3 198 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9799g00001 Vium-Chr9799 3906 4524 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9799g00001 1 201 Calmodulin-binding Proteins AT3G12580 50.495 2.66e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9799g00001 K03283 - vum:124848908 387.497