Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9783g00003 ATGGATCTTGAATCCAGGAAGTGTTGGGATACCTCAAAGAAGGACTCTTGGAAGACTGTTATGCTCTTGGCCTACCAAAGCCTTGGTGTGGTATATGGGGACTTGAGCATTTCTCCTTTGTATGTGTACACGAGCACATTTGCGGAAGATATTGAACATTCAGAGACCAATGAAGAGATTTTTGGTGCCCTCTCTTTTGTATTCTGGACTCTGACACTGGTGCCACTCTTCAAATACGTTTTTGTGGTTCTTAGAGCTGATGATAATGGAGAAGGTGGTACGTTTGCTCTATATTCCTTGATTTGTAGGCATGCCAAAGTCAGTCTCCTACCAAATCGACAACATGCGGATGAAGCGCTTTCTACATATAAGATGGAGGAGCCTCCAGAGAAAGATACTTCTCGAGTTAAGATGGTACTTGAGAAATATAAGGGTTTGCATACGGCTCTCCTAATCGTGGTTCTTCTTGGCACTTGTATGGTAATAGGGGATGGACTTCTTACCCCAGCTATTTCTGTTTTCTCGGCAGTATCTGGTCTTGAGGTATCTATGTCCAAGAAACACCACCAGTATGCTGTGATTCCCATCACTTGCTTCATACTGGTTTGTTTGTTCGCACTGCAACACTATGGTACACATAGGGTGGGGTTCCTTTTTGCTCCAATTGTGTTAGCATGGCTGTTGTGCATCAGCACACTTGGTCTATATAATATATTCAAATGGAATCCACATGTATATAAAGCTCTTTCGCCATATTATATGTTCAAGTTCTTGAAGAAGACAAGGATAAGTGGATGGATGTCTTTGGGGGGAATATTGCTGTGCATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGCCATTTCTCATATATGGCCATTCAGACTGCATTCACCTTTCTGGTATATCCTGCGCTTATATTGGGATATATGGGACAAGCTGCGTATTTGTCACATCATCATGATTCTGATCTCCAAATCAGTTTCTATGTCTCAGTTCCAGAAAGTGTGAGGTGGCCAGTGCTTATCTTAGCCATTCTAGCTTCAGTTGTGGGAAGCCAAGCAATCATCAGTGGAACATTTTCAATCATAAACCAGAGCCAATCTCTAGGTTGCTTCCCAAGAGTCAAGGTTGTCCATACATCTGACAAGATACATGGTCAGGTCTACATTCCCGAGATTAATTGGTTACTCATGATCCTCTGTATTGCTGTGACCATTGGATTTAGGGACACAAAACACATGGGAAATGCTTCAGGATTAGCAGTGATGACTGTGATGCTGGTAACGACATGCCTTACTTCGCTGGTAATCGTAGTTTGCTGGCACAAACCCCCCATAGTAGCACTCTGTTTCCTGTTATTCTTTGGCTCTATTGAACTGCTGTATTTCTCAGCTTCCCTCACAAAGTTTTGTGAGGGTGCCTGGTTACCAATCCTTCTGGCACTCTTCCTCATGATTATAATGTTCCTTTGGCACTATGCAACCATCAGAAAATATGAATATGACCTTCACAACAAGGTATCACTAGATTGGCTTCTAGCCTTAGGACCTAGCTTAGGAATTGCTAGAGTTCCAGGAATAGGACTAGTGTTCACTGACCTCACAGCTGGTATCCCAGCAAACTTCTCCCGCTTTGTGACCAACCTTCCTGCATATCATCGCATCCTTGTTTTTGTGTGTGTGAAATCAGTGCCTGTCCCTCACGTTCCTGCTGCTGAGAGGTATCTTGTGGGGCGTGTAGGACCTTCTGCTCATCGGTCCTACAGATGTATAGTCAGATATGGATATCGTGATGTTCATCAAGATGTTGATTCCTTTGAGTCAGAACTAGTAGCAAGACTTGCAGATTTCATCCAATATGATTGGTACAGGAGTAGGAGGAGCAGCATGAGCGTTGAGGATGATGTCTCAAACTCTAATGAATCATCAAGTCACAGACTAACTGTGATTGGAACAACTGGTTTCTCCATCCAACCAGGATATGAGAGTGGTGGTGAGAGTGTGCAGCAAGCCAGTGTCTCTGTTGGATTCCCTACAGTTCAAAGTGTGAGTGATGTTATTGAGATGGAACCAACAGTGAGTGAGAGGAGAGTGAGGTTTGCTATTGACTATGAGCCTGAGAGCGATGCAAGGTCTGAGGTAGGAGTGCAGATGCAGGAAGAACTGGAAGATCTTTATGCTGCTCAAGAAGCTGGGATTGCCTTCATTCTTGGACATTCCCATGTAAGAGCAAAGCAAGGCTCATCTGTCCTGAAGAAATTGGCACTTAACTACGGCTACAATTTCTTGAGAAGGAATTGTAGAGGCCCTGATGTAGCACTTAAGGTTCCCCCAGTTTCTCTTTTGGAGGTTGGCATGGTTTACATTGTGTAG 2376 0.4373 MDLESRKCWDTSKKDSWKTVMLLAYQSLGVVYGDLSISPLYVYTSTFAEDIEHSETNEEIFGALSFVFWTLTLVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQHADEALSTYKMEEPPEKDTSRVKMVLEKYKGLHTALLIVVLLGTCMVIGDGLLTPAISVFSAVSGLEVSMSKKHHQYAVIPITCFILVCLFALQHYGTHRVGFLFAPIVLAWLLCISTLGLYNIFKWNPHVYKALSPYYMFKFLKKTRISGWMSLGGILLCITGSEAMFADLGHFSYMAIQTAFTFLVYPALILGYMGQAAYLSHHHDSDLQISFYVSVPESVRWPVLILAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQVYIPEINWLLMILCIAVTIGFRDTKHMGNASGLAVMTVMLVTTCLTSLVIVVCWHKPPIVALCFLLFFGSIELLYFSASLTKFCEGAWLPILLALFLMIIMFLWHYATIRKYEYDLHNKVSLDWLLALGPSLGIARVPGIGLVFTDLTAGIPANFSRFVTNLPAYHRILVFVCVKSVPVPHVPAAERYLVGRVGPSAHRSYRCIVRYGYRDVHQDVDSFESELVARLADFIQYDWYRSRRSSMSVEDDVSNSNESSSHRLTVIGTTGFSIQPGYESGGESVQQASVSVGFPTVQSVSDVIEMEPTVSERRVRFAIDYEPESDARSEVGVQMQEELEDLYAAQEAGIAFILGHSHVRAKQGSSVLKKLALNYGYNFLRRNCRGPDVALKVPPVSLLEVGMVYIV 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9783g00003 791 Pfam K+ potassium transporter 25 599 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium9783g00003 791 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 12 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium9783g00003 791 NCBIfam potassium uptake protein 23 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9783g00003 Vium-Chr9783 18906 23866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9783g00003 1 791 Inorganic Solute Cotransporters AT2G40540 78.137 0.0 1271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9783g00003 K03549 - gmx:100806122 1508.04