Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium974g00025 ATGCAACGTTTGTGCTATGACAACTCATTTCTGAAGAGTTATTCTTTCTTCACTTTACTTCATCACTTCGCTCTCGTCTTCTTCAGCATTCCATTTTTCTCCTTTCATCAATCTTTCTGCGCATCCATGGTGAACAGAATTCCTAGCTATGCCTCCAAATATCATAAACAACAGGGAAAGTCAGCGACAGAGGTTAGTAGAAGATCTTTGAAGACCAAGATTAAAGTGTTGGCAGATAAATACCATGCCGAGAGAGGGGTATCAGTTAAAGAAAAGGTTCATAGACATTGGAGGAATCTTGAGCCTGTTTTTCCAACGACTAAGAGAGTATTATCAGGGAATGAGTATTTGCAGGTAGGGGAAAACGTCAATAAGCTGTCTTTGAGAATTGACAATCCTTTATGTAAATTCAATGGGTTCCCTGAAGCTACACTAGAGGAGGATCAATTCAATGATGTGGAAATATCAGCAGCAGAAAGTACTAGGATTCCAAAAGAGGAAAAACTACCAACATATACGGCTTGGGTATATGTGGCCAGAAATGAGAAAATGGCTAAAGATCAATCGGTTATTGGAAAATACCAGATGTACTATGACAAAGATAGAGGTGAAATGATGATATGCAGTGATAATGAGGAAGAGATACCAAATACCCAGAATGTTGAACATGAATTCACTGAGGCTGAAGACCAAATTCTGAGGATGACACTCGAGGAATATGGGACTACTAAGGAGGTATTGGGTATCATTGAAGAGATTTTTGAGACTGACGATTCACAAATTCAGGAGAGGTATGAAAAACTAAAGGAAAAGAGTATGGAGAGTCTGGATCAACATTCTAAAGATTGTCATTGTAAAGGATGTCAGAAACATTTTGGAGTATGTTTAAAGAAAGGTCTGGGTGGGACTTTAGAAACTTTTGATAAAATCTTCTGTCGTCGATGTTTGATCTTTGACTGTGCTATCCATGGCACTGATCAACCTTTAATATATCTTAGCGAAAAACATGTCTGCTCTGAACCTGAAGTTGGTAGGAAACCATGCAGTGATCAATGTTACCTTCTGGATAAAGGGATTACACCAATGGAAGAGGACACGACATTGCCTCCTAATGAGCCTCAGAGTTCTTGTGAGCTGAAGAGAACCTCAGATGATATAATTATCGATATTGGCAATCATTACAGTGAACTAAATTTGGATGCTAGTGACAATGAAAATCACACAACATCTAGCGCATCTTTGGAAAGTCTTGGTGAACATGCTTCAAAGAAATTACCAGTTTCTGGTAGCTTTGACCATGGTGAGCGGGACAAAGGAGTTATGAATGGACAAGAAGATCTTACAATGGAGATAGAATTTAATGAGATGCCCATTTCAAAGGACGTGCAAACTGATAAGATGATGATTGACTCAGATTGGAGACCTCTAGAGAGGGATTTATATTTGAAGGGAGTAGAAATGTTTGGAAAAAATAGTTGCCTCATAGCCGCTACTTTTTTTCATGGCTTGAAGACTTGCTTGCAAGTAGCAAGCTATATGTTTTCTGGTGGAGAGTCAATGATCCATGGATCCACAACAAATTCAATCGTGGATAGAAATGAAAATATCAATGCAGAGTTCACAGACCTAGAAATGTCATCAAGATCAAGATCACAACGGAAAAAGGGAAAACCTAGGAAGTTCAACTATACTCGAAAGTCTGCCGGTCTGCCCCCTAGATGGAGAAAAATTGCTTATGGGCAAAACATGTGCAATAAGCAATATACTCCTTGTGGATGTCATGGAATGTGTGGAAAGGAATGCTCTTGTCTTCTTAATGGAACTTGCTGTGAAAAATATTGTGGGTGTTCAAAGATATGCACAAATCGATTCAGAGGATGTCATTGTACCAAGAGTCAATGCAGAAGTCGATTATGTCCGTGCTTTGCAGCCAATCGTGAATGTGACCCAGATGTCTGTCGAAATTGTTGGGTTAGTTGCGGCGATGGTTCATTAGGGGAGCCACCTCGACGTGGAGATAGCAAATGCGGAAATATGAATATTCTCTTAGGACAAAAAGAGAGGATTCTTTTGGCAAAATCAGACGTTGTAGGATGGGGAGCCTTCGCAAAGAATCCGATTAACAAAAATGTTTGTCTAGGAGAGTACAAGGGTGAATTAATCCCTCCTAAAGAAGCAGAAAAACGTGGAAAACTATATGATCGTGTCAACACTTCCTTCCTTTTTAACCTCAATAATGAGTGGGTTATTGATGCACATCGCCTAGGAGACAAATTAAAATTTGCGAACCATTCATCAAAACCCAACTGCTATGCAAAGGTGATGCTTGTTGGAGGAGAACATCGAGTGGGAATATATGCCAAGGAAAACATTGAAGCTGGTGATGAGATTTTTTACGACTATTGGTATGATCTAGAATGTGCACCATCATGGGCTCTTCCACCAGAAGACAATGCTTCCAAAAAAGATGAATTAGGCATTTCTCAGAGCAAGGCAAAGAAGCGTTAG 2508 0.3959 MQRLCYDNSFLKSYSFFTLLHHFALVFFSIPFFSFHQSFCASMVNRIPSYASKYHKQQGKSATEVSRRSLKTKIKVLADKYHAERGVSVKEKVHRHWRNLEPVFPTTKRVLSGNEYLQVGENVNKLSLRIDNPLCKFNGFPEATLEEDQFNDVEISAAESTRIPKEEKLPTYTAWVYVARNEKMAKDQSVIGKYQMYYDKDRGEMMICSDNEEEIPNTQNVEHEFTEAEDQILRMTLEEYGTTKEVLGIIEEIFETDDSQIQERYEKLKEKSMESLDQHSKDCHCKGCQKHFGVCLKKGLGGTLETFDKIFCRRCLIFDCAIHGTDQPLIYLSEKHVCSEPEVGRKPCSDQCYLLDKGITPMEEDTTLPPNEPQSSCELKRTSDDIIIDIGNHYSELNLDASDNENHTTSSASLESLGEHASKKLPVSGSFDHGERDKGVMNGQEDLTMEIEFNEMPISKDVQTDKMMIDSDWRPLERDLYLKGVEMFGKNSCLIAATFFHGLKTCLQVASYMFSGGESMIHGSTTNSIVDRNENINAEFTDLEMSSRSRSQRKKGKPRKFNYTRKSAGLPPRWRKIAYGQNMCNKQYTPCGCHGMCGKECSCLLNGTCCEKYCGCSKICTNRFRGCHCTKSQCRSRLCPCFAANRECDPDVCRNCWVSCGDGSLGEPPRRGDSKCGNMNILLGQKERILLAKSDVVGWGAFAKNPINKNVCLGEYKGELIPPKEAEKRGKLYDRVNTSFLFNLNNEWVIDAHRLGDKLKFANHSSKPNCYAKVMLVGGEHRVGIYAKENIEAGDEIFYDYWYDLECAPSWALPPEDNASKKDELGISQSKAKKR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium974g00025 835 SUPERFAMILY SET domain 557 805 IPR046341 -
Vium974g00025 835 FunFam Putative histone-lysine N-methyltransferase EZH2 588 804 - -
Vium974g00025 835 Pfam CXC domain 626 657 IPR041355 -
Vium974g00025 835 MobiDBLite consensus disorder prediction 399 417 - -
Vium974g00025 835 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 62 822 IPR045318 GO:0006338|GO:0042054
Vium974g00025 835 MobiDBLite consensus disorder prediction 817 835 - -
Vium974g00025 835 CDD SET_EZH 687 803 - -
Vium974g00025 835 SMART CXC_2 622 659 IPR033467 -
Vium974g00025 835 ProSiteProfiles CXC domain profile. 574 673 IPR026489 -
Vium974g00025 835 MobiDBLite consensus disorder prediction 544 564 - -
Vium974g00025 835 ProSiteProfiles SET domain profile. 687 802 IPR001214 GO:0005515
Vium974g00025 835 SMART set_7 687 808 IPR001214 GO:0005515
Vium974g00025 835 MobiDBLite consensus disorder prediction 399 438 - -
Vium974g00025 835 Pfam SET domain 698 801 IPR001214 GO:0005515
Vium974g00025 835 Gene3D SET domain 588 803 IPR046341 -
Vium974g00025 835 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 4 835 IPR025778 GO:0031519
Vium974g00025 835 MobiDBLite consensus disorder prediction 813 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium974g00025 Vium-Chr974 256624 275705 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium974g00025 676 801 C2H2 Transcription Factor Family AT2G23740 28.671 3.22e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vium974g00025 SET 9.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium974g00025 - - vra:106776653 1570.83