Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium974g00016 ATGTCTGACTCACATCTAACTTTCTACTCTCCTTCGTCCATTCTTGCTCTTCTTCCAATCTTCTTCGTCTTCTTCATTCTTATCAAAAGAAAGCAAACCAAACCCAGGCTCAATCTTCCACCAGGTAACATGGGCTGGCCATTTCTTGGTGAAACCATTGGCTATTTGAAGCCTTATTCTGCTACCACAATAGGGGAATTCATGGAGCAGCACATAGCAAGGTATGGTACAATTTACAAGTCGAAGCTATTTGGGGAGCCCGCTATAGTGTCAGCAGACGCAGGACTCAACAGGTTCATTCTACAGAACGAGGGGAAACTGTTCGAGTGCAGCTACCCCAGAAGCATTGGTGGAATACTCGGGAAATGGTCCATGCTGGTCTTAGTTGGCGACATGCACAGAGACATGCGGGTTATATCGCTCAACTTCCTAAGCCACGCCAGGCTCAGAACCCACCTCTTGAGAGATGTGGAGAAACACACCCTCTTGGTTCTAAACTCTTGGAACCAAAATTGCACATTCTCGGCCCAAGATGAAGCCAAGAAGTTCACCTTCAATCTGATGGCTAAGCATATCATGAGCATGGATCCTGGGGAAATCGAGACAGAGCAACTGAAGAAAGAGTATGTCACTTTCATGAAAGGGGTGGTATCCGCGCCACTGAATCTACCTGGAACTGCATACCGAAAGGCGTTAAAGTCTAGGTCCACCATACTGAAGTTCATAGAGGGGAAAATGGAAGAGAGAGTAAAGAGAATCCAAGAGGGAAACGAGAGTTTGGAGGAAGACGATCTTCTGAACTGGGTTTTGAAGCACTCGAATCTCTCGACGGAACAAATTCTGGACTTGATTCTGAGCTTGCTCTTCGCTGGCCATGAAACTTCGTCGGTAGCCATAGCTCTAGCCATTTACTTTTTGCCCGGTTATACTCAAGCTATGCAACAGTTAAGGGAAGAGCACAGTGAAATTGCCAGAGCCAAGAAACAAGCAGGGGAAGTGGAACTCACATGGGACGATTACAAAAGAATGGAATTTACTCATTGTGTTGTGAACGAGACACTGAGGTTGGGAAATGTTGTGAGGTTTCTCCACAGGAAGGCTCTGAAAGACGTTAATTATAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACAATTCAATCCATGGAGATGGCAGAACAATGGCGGTCGTGGGAGTTGTCCGAGCAAGAGCGCAGCAAACAGTAACTTTCTGCCGTTCGGAGGAGGATCACGGCTGTGCGCGGGATCAGAGTTAGCGAAGCTTGAAATGGCGGTTTTCATCCATTATCTCATCCTCAACTACCACTGGGAATTGGCAGAAACAGATCAAGCTTTTGCCTACCCATTCGTGGACTTCCCAAAGGGCCTACCCATTAGAGTCCAGGCCCACTCTCTCATTTGA 1476 0.4695 MSDSHLTFYSPSSILALLPIFFVFFILIKRKQTKPRLNLPPGNMGWPFLGETIGYLKPYSATTIGEFMEQHIARYGTIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLRDVEKHTLLVLNSWNQNCTFSAQDEAKKFTFNLMAKHIMSMDPGEIETEQLKKEYVTFMKGVVSAPLNLPGTAYRKALKSRSTILKFIEGKMEERVKRIQEGNESLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGYTQAMQQLREEHSEIARAKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVNYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQQFNPWRWQNNGGRGSCPSKSAANSNFLPFGGGSRLCAGSELAKLEMAVFIHYLILNYHWELAETDQAFAYPFVDFPKGLPIRVQAHSLI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium974g00016 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Vium974g00016 491 SUPERFAMILY Cytochrome P450 36 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00016 491 Gene3D Cytochrome P450 28 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00016 491 CDD CYP90-like 71 485 - -
Vium974g00016 491 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00016 491 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00016 491 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00016 491 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00016 491 Pfam Cytochrome P450 40 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00016 491 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00016 491 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00016 491 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00016 491 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00016 491 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00016 491 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00016 491 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00016 491 Coils Coil 243 263 - -
Vium974g00016 491 Coils Coil 309 329 - -
Vium974g00016 491 PANTHER CYTOCHROME P450 26 35 466 - -
Vium974g00016 491 FunFam Cytochrome P450 90B1 29 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium974g00016 Vium-Chr974 177157 181584 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium974g00016 29 410 Cytochrome P450 AT3G50660 76.675 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium974g00016 K09587 - gmx:100789515 917.146