Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium974g00015 ATGTCTGACTCACATCTAACTTTCTACTCTCCTTCGTCCATTCTTGCTCTTCTTCCAATCTTCTTCGTCTTCTTCATTCTTATCAAAAGAAAGCAAACCAAACCCAGGCTCAATCTTCCACCAGGTAACATGGGCTGGCCATTTCTTGGTGAAACCATTGGCTATTTGAAGCCTTATTCTGCTACCACAATAGGGGAATTCATGGAGCAGCACATAGCAAGGTATGGTACAATTTACAAGTCGAAGCTATTTGGGGAGCCCGCTATAGTGTCAGCAGACGCAGGACTCAACAGGTTCATTCTACAGAACGAGGGGAAACTGTTCGAGTGCAGCTACCCCAGAAGCATTGGTGGAATACTCGGGAAATGGTCCATGCTGGTCTTAGTTGGCGACATGCACAGAGACATGCGGGTTATATCGCTCAACTTCCTAAGCCACGCCAGGCTCAGAACCCACCTCTTGAGAGATGTGGAGAAACACACCCTCTTGGTTCTAAACTCTTGGAACCAAAATTGCACATTCTCGGCCCAAGATGAAGCCAAGAAGTTCACCTTCAATCTGATGGCTAAGCATATCATGAGCATGGATCCTGGGGAAATCGAGACAGAGCAACTGAAGAAAGAGTATGTCACTTTCATGAAAGGGGTGGTATCCGCGCCACTGAATCTACCTGGAACTGCATACCGAAAGGCGTTAAAGTCTAGGTCCACCATACTGAAGTTCATAGAGGGGAAAATGGAAGAGAGAGTAAAGAGAATCCAAGAGGGAAACGAGAGTTTGGAGGAAGACGATCTTCTGAACTGGGTTTTGAAGCACTCGAATCTCTCGACGGAACAAATTCTGGACTTGATTCTGAGCTTGCTCTTCGCTGGCCATGAAACTTCGTCGGTAGCCATAGCTCTAGCCATTTACTTTTTGCCCGGTTATACTCAAGCTATGCAACAGTTAAGGGAAGAGCACAGTGAAATTGCCAGAGCCAAGAAACAAGCAGGGGAAGTGGAACTCACATGGGACGATTACAAAAGAATGGAATTTACTCATTGTGTTGTGAACGAGACACTGAGGTTGGGAAATGTTGTGAGGTTTCTCCACAGGAAGGCTCTGAAAGACGTTAATTATAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACAATTCAATCCATGGAGATGGCAGCAGCAGTGGCCTACGGAACTGCACGTTAATATTACGGATGGATCCAAATGA 1281 0.4606 MSDSHLTFYSPSSILALLPIFFVFFILIKRKQTKPRLNLPPGNMGWPFLGETIGYLKPYSATTIGEFMEQHIARYGTIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLRDVEKHTLLVLNSWNQNCTFSAQDEAKKFTFNLMAKHIMSMDPGEIETEQLKKEYVTFMKGVVSAPLNLPGTAYRKALKSRSTILKFIEGKMEERVKRIQEGNESLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGYTQAMQQLREEHSEIARAKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVNYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQQFNPWRWQQQWPTELHVNITDGSK 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium974g00015 426 Gene3D Cytochrome P450 28 420 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00015 426 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00015 426 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00015 426 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00015 426 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00015 426 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00015 426 FunFam Cytochrome P450 90B1 29 424 - -
Vium974g00015 426 Pfam Cytochrome P450 40 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00015 426 CDD CYP90-like 71 410 - -
Vium974g00015 426 PANTHER CYTOCHROME P450 26 35 414 - -
Vium974g00015 426 Coils Coil 309 329 - -
Vium974g00015 426 SUPERFAMILY Cytochrome P450 36 411 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium974g00015 426 Coils Coil 243 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium974g00015 Vium-Chr974 176463 181585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium974g00015 29 411 Cytochrome P450 AT3G50660 76.733 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium974g00015 K09587 - gmx:100802498 765.763