Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9716g00001 ATGGCTGATGTAAATGCCGCTTCATTTGAGGCCTTTGTCCAAGGCTGGATGGTGCGCCAAAAAGCCTTCCTTGGTGAGCTTCACTCAGCTCATCAACAGTATCAGGAGGGGAGGAGAGCAGATGTAAGGCCCTTGATCGACAGGGTCATTTCGCACTATGGTCAATACTTCGAAGAGAAATCAAAGATCGCACACCACGATGTTTTTCTTATTTTCTCACCACCATGGTTCAGTTCATTAGAACAATCCTTTCTTTGGGTTGGGGGGTTCAAGCCTGGAGTGGCTTTTCAGGTTGTGAACACAGCTTTGGGGGACTTGACACAAGACCAAAAGGAGAAGTTGACTGAACTGAAACAAGAGACCAAAGTGAAGGAGAGAACTCTCAATGATGACTTGGCCAAGCTTCAAGAGAGCGTAGCAGATCCTCCGCTGGTGGGCCTGGCCAGAAGCCAGGGCAGATTGTGTTTCAGCGGTTCCTTCGTGACAGACCAAGGTTCGGTCCCAAACACTTTCAAAGAGAAATTGGAGAATCTGGTGGCAAATGCAGATGCTTTGAGGACAGACACAGCTCTGAATATTTTGAAGATACTGAGACCTGCTCAGATTGTCAAATTCATGGCTTCTGCGGCTGAGCTTCAGATCAAGGTTAGGTCTTGGGGTTTGGACAAGGATTCCCAGAATGGAGGCGAAGACTGA 696 0.4799 MADVNAASFEAFVQGWMVRQKAFLGELHSAHQQYQEGRRADVRPLIDRVISHYGQYFEEKSKIAHHDVFLIFSPPWFSSLEQSFLWVGGFKPGVAFQVVNTALGDLTQDQKEKLTELKQETKVKERTLNDDLAKLQESVADPPLVGLARSQGRLCFSGSFVTDQGSVPNTFKEKLENLVANADALRTDTALNILKILRPAQIVKFMASAAELQIKVRSWGLDKDSQNGGED 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9716g00001 231 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 228 - -
Vium9716g00001 231 Pfam Seed dormancy control 25 100 IPR025422 GO:0006351|GO:0043565
Vium9716g00001 231 Coils Coil 118 138 - -
Vium9716g00001 231 ProSiteProfiles DOG1 domain profile. 6 226 IPR025422 GO:0006351|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9716g00001 7 218 Calmodulin-binding Proteins AT1G77920 28.774 8.96e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9716g00001 - - vun:114185413 402.134