Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9655g00002 ATGAGCCACCGCAAGGAGGAATCACCGTCGCCGTTGCCTCTGCTTCGAAGCAGCGAAAGAGATGACGGCTCGTGGTCCGGGTCAGGGTCAGGGTCAAAGGCATCGCTTAGTGGTTCTGTGTTCAATTTATCTACAACGATCATCGGTGCTGGGATCATGGCCTTGCCGGCGGCCATGAAAGTTGTGGGTGTGAGTGTGGGCGTTGGTGCCATCATCTTCCTGGCCTTCCTCACGCACACCTCTCTCGAGATTCTTCTCAGATTCAGTAGAGCCGCCAAGGCCGCCACCTACGCCCACCTCATGGGGGATGCTTTTGGGAGCTCCGGAACCCTGCTCTTTCACGTGGCGGTGCTTCTCAACAACTTTGGGATACTTGTTGTTTACGTCATCATAATTGGTGATGTCTTGTCTGGAACATCTTCCAGTGGAGTCCATCATTTCGGGGTGCTTGAAGGCTGGTTCGGCCAGTGCTTCTGGACAACCCGTACTTTCGTTCTGCTTCTCGCAACTCTCTTCGTATTTGCTCCATTGGCCTTCTTTAAGAGGATAGATTCGTTGAGACATAGTTCTGCTTTAGCAGTGGCTCTGGCCATTGTGTTTCTACTCATAACTGCGGGAATCACGTTCTTCAAATTGTTTAATGGCAGCATAGCCAGTCCCAGGATGCTTCCTAACATTACTGATGTTTCATCCATATGGAATCTCTTTACTGCCGTTCCAGTTCTTGTGACGGCATTTGTTTGTCACTACAATGTGCATACAATCGAAAATGAATTAGGAGACCCTTCCTTGATGCAACCGGTTATACGTGCATCACTGGTTCTGTGTTCTAGTATTTATATTCTTACAGCATTATTTGGAGTTCTCCTATTTGGTGAGTCAACACTTGATGATGTGCTGGCCAACTTTGATACTGATCTGGGTATCCCTTATAGCAGTCTACTCAATGACATTGTTCGTATCAGCTACGCCCTCCACCTCATGCTTGTTTTCCCAGTTATCTTCTTCTCATTGCGCTTCAATTTGGACGATCTCATCTTTCCTTCAGCTAGGTCCTTGGATTTAGATCATCGTAGGTTTGTCTTGATCACCATTGGACTCATCACTTTAATATATGTGGCTGCAAATTTTTTACCTACTATCTGGGATGTGTTTCAATTCACTGGAGCTACTGCCACCGTTTGCCTTGGGTTTATTTTCCCTGCTGCAATTTCTATCAGGGATCCTCATGGGATTTCAACAAAGAAGGACAAGGTTTTATCCATTGTCATGATTTTTCTTGCTGTGTTCTCAAATGTAGTGGCTATATACAGTAATGCTGAATCTTTGTTCGGAAAACGTGTGGATCCTCAGCAATGA 1359 0.4621 MSHRKEESPSPLPLLRSSERDDGSWSGSGSGSKASLSGSVFNLSTTIIGAGIMALPAAMKVVGVSVGVGAIIFLAFLTHTSLEILLRFSRAAKAATYAHLMGDAFGSSGTLLFHVAVLLNNFGILVVYVIIIGDVLSGTSSSGVHHFGVLEGWFGQCFWTTRTFVLLLATLFVFAPLAFFKRIDSLRHSSALAVALAIVFLLITAGITFFKLFNGSIASPRMLPNITDVSSIWNLFTAVPVLVTAFVCHYNVHTIENELGDPSLMQPVIRASLVLCSSIYILTALFGVLLFGESTLDDVLANFDTDLGIPYSSLLNDIVRISYALHLMLVFPVIFFSLRFNLDDLIFPSARSLDLDHRRFVLITIGLITLIYVAANFLPTIWDVFQFTGATATVCLGFIFPAAISIRDPHGISTKKDKVLSIVMIFLAVFSNVVAIYSNAESLFGKRVDPQQ 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9655g00002 452 PANTHER AMINO ACID TRANSPORTER 29 431 - -
Vium9655g00002 452 Pfam Transmembrane amino acid transporter protein 34 440 IPR013057 -
Vium9655g00002 452 MobiDBLite consensus disorder prediction 21 35 - -
Vium9655g00002 452 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9655g00002 Vium-Chr9655 14785 18133 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9655g00002 32 452 Amino Acid or Auxin Permease AAAP Family AT3G30390 62.945 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9655g00002 K14207 - gmx:100778699 730.709