Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9630g00001 ATGGATGCGAATCAGACACTCTTCTCTTCAGTGATGTTATTGCACGAAGTGCCATCGTTGGGATTTGAGGTCTACAATGTGTGCGTGAATCATCCAATGAAGATAATATCCGATGGCATATGGACACAACATGGAAGTGCATTTCCTACACAGTATTCATACACCATGCTTGAGCTTCAAATACTTATCATCTTCGTGGTCACGCAAGGCTTTCATTTCATTCTCAATCGATTAGGCGTCCCTTTTTTCGTTTCACAAGTCATGACAGGGTTTCTGATGGGGCCATCAGTTCCGACAGGACCATTGGAAAAGTACAAGAAGATGCTGTTCCCGTTCGGGAGTCCAGACATCCTAAGCACACTATCATCGTTAGGGTACTCCTTCTACCTGTTCCTGAACTCAGTGCAGATGGACCTAAGCTTGATCACGAAAACAGGGAGAAAGGCTTGGGTGATAGGGCTTTGCTGCTATGGCATTCCCATAGTGGTGGGGTGTGGGAGCATGGGGTTGTCGAATTCCACGTGGAAGAGGATCCTGGGAGAGGACATTTCTGCTTTGCCTGTGGTTTTCATATCTCACAGTAGTTGCTCCTTCGCTGTCATTTCATGGTTGCTCAATGACCTCGGAATCCTCAACTCCGAACTCGGACGCCTCGCACTCTCCGCAGCTTTTGTTAACGATGTTGCAGGTGGACTCTGGGCAGGGATTGGTGCTGCATATTTCGGGAGACAGAACATGAGCATGTCTATCCGTATTAGAAACGTTACGGCATTTCTTGCTTACGCAATCTTCATTCTTCTTATTGGTCGTCCTGCGATGAGGTGGATCGTGAAGAGGACCCCAGAAGGTAGATCGGTTAACAAGGGATACATCTACGCCATCATAGTAGTGTTCTTGGGATTGGGCTACTTTGCCAAGTTTTTCGGTGAACCCTTCTTAGTAGGAGCTGTTATTTTTGGACTTGCAGTCCCTGAGGGTCCTCCTCTGGGTTCTGCACTCGTTACCCAACTTGAGCTGTTCTCCAAGTGGTTCCTCTGCTCCATTTTTGTCACATGTGTCACCATGAAGGTGGATCTCACCAAATGTAACTCTCTCTCCTTCGTAATTGTCATTTCTGGTGTCATCATTATGGTGCACCTGGTTAGGTGGCTTTTGTGCATGGGAATTTGCCGATACTGCAAGATTCCCTTCAAGGATGGCTTTTGTCTTGCTCTCATTTTGAGCTGCAAAGGGGTTGTTGATATCTGCTCCTATCTCCTAGTCTACGATGCCATGGTACAAAAGAGAACAGTAGTAGATGTTATGATCGTCTCAGTGTTGGTCCTAGGTACGGCTTCGAGGTTTGGTGTGAAGGCATTGTATGACCCTTCAAGGAAATACGCAGGGTACCAGCATAGGAACATCATGAGCTTGAAACACAGTGAACTTCGGATAGTTGCATGCATCCACAAGCCATGGCACTCGGTTCACATCAAGAACGTGCTCGAATTTTGCTCCCCGGCACCAGATAACACACTGGTAGCAGAAATTTTGCACCTCATGGAGCTAGTTGGAAGGTCCAATCCCATTTTCATTGCACACAAACTTCAGCAAAGTGCAGGATCATCATCCTACAACTACTCTGGGGAACTCATTGTAGCCTTTGACCTTTTCGAACGTGACTATCTTGGTGCTGTCACTGCCAATACCTACACTGCCATATCCCCAGTGATGTTCATGAATGAAGATGTGTGCAACCTTGCTTTGGACAAAAATGCAGCCCTTATAGTCCTTCCATTCCATGTGAAATGGGGAGGGGATGGTTCAGTTGAGTCAGAGGATAGCAACATAAGGGCGCTTAATGCCAGGATTTTAGAAAGGGCACCTTGCTCTGTTGGGATTCTTGTGAACCGTGGCCCTAGCTTCAACTCAAGAAGAATCAGAGCGGCCATGGTTTTCTTGGGAGGACCTGATGATAGAGAGGCCTTGTGCTTGGCTAAGAGGTTTGTCAAAGATGTTGATAATAGTTTGGTTGTGTTCAGGTTGTTGGCACACGACAAAGATACCTCCAATTGGGATCACATGATTGATGATGAAGCGATGAGGGAAATAAGTGGAGTTCATGTTAATCTAGAAAATGTTAGATATGAAGAGATTACTATAGGAGATGCATCCCAGACAACGTTTCTCATCAAAGATATAGCCAACAAATTTGATTTTATTGTAGTTGGTAGACGCTATGGGGTCAGATCTTCTCAGACCTATGGCTTGGAGCATTGGACTGAATATTCAGAGTTAGGGGTAATTGGTGATTTGCTTGCTTCACATGATACAGATACTACGGCTTCAGTTTTGGTTGTGCAACAACAACCATCTCATGAAGACCACAGATAA 2373 0.4564 MDANQTLFSSVMLLHEVPSLGFEVYNVCVNHPMKIISDGIWTQHGSAFPTQYSYTMLELQILIIFVVTQGFHFILNRLGVPFFVSQVMTGFLMGPSVPTGPLEKYKKMLFPFGSPDILSTLSSLGYSFYLFLNSVQMDLSLITKTGRKAWVIGLCCYGIPIVVGCGSMGLSNSTWKRILGEDISALPVVFISHSSCSFAVISWLLNDLGILNSELGRLALSAAFVNDVAGGLWAGIGAAYFGRQNMSMSIRIRNVTAFLAYAIFILLIGRPAMRWIVKRTPEGRSVNKGYIYAIIVVFLGLGYFAKFFGEPFLVGAVIFGLAVPEGPPLGSALVTQLELFSKWFLCSIFVTCVTMKVDLTKCNSLSFVIVISGVIIMVHLVRWLLCMGICRYCKIPFKDGFCLALILSCKGVVDICSYLLVYDAMVQKRTVVDVMIVSVLVLGTASRFGVKALYDPSRKYAGYQHRNIMSLKHSELRIVACIHKPWHSVHIKNVLEFCSPAPDNTLVAEILHLMELVGRSNPIFIAHKLQQSAGSSSYNYSGELIVAFDLFERDYLGAVTANTYTAISPVMFMNEDVCNLALDKNAALIVLPFHVKWGGDGSVESEDSNIRALNARILERAPCSVGILVNRGPSFNSRRIRAAMVFLGGPDDREALCLAKRFVKDVDNSLVVFRLLAHDKDTSNWDHMIDDEAMREISGVHVNLENVRYEEITIGDASQTTFLIKDIANKFDFIVVGRRYGVRSSQTYGLEHWTEYSELGVIGDLLASHDTDTTASVLVVQQQPSHEDHR 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9630g00001 790 PANTHER CATION/H + ANTIPORTER 30 783 - -
Vium9630g00001 790 Pfam Sodium/hydrogen exchanger family 62 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vium9630g00001 790 Gene3D - 55 461 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9630g00001 Vium-Chr9630 895 4549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9630g00001 27 780 Antiporter Super Family AT3G44900 36.139 7.87e-144 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9630g00001 K26731 - gmx:100797272 1125.92