Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9590g00001 ATGGCTTCTTCAATGAGGATCTCAAGGCTGCTCTCTCGTTCTTTCCTTTCTGCTACCACTAGTTCTTTGTTTTCTAGAGGTGGAAGTGGTGGTCTTGGTGGAGGACTCAGTAAATTCAGCACTGCTGCTGCCACTGAAGAACCAATTAAACCAGCAGTTAGAGTAGAACACACCCAGCTCTTAATTGATGGAAAATTTGTTAACTCTGCTACCGGCAAAACTTTTCCAACGCTGGATCCCAGAACAGGAGATGTGATTGCTCATATTGCTGAGGGGGACCATGAAGATGTTGATAGAGCAGTTGTCGTGGCTCGCAAGGCATTCGACCATGGACCTTGGCCTAAGATGACAGCCTATGAAAGACAAAAGATATTGCTACGTGCTGCTGATCTGATTGAAAAACACACTGACCAGATTGCTGCACTTGAGACATGGGATACTGGGAAGCCATACGAACAAGTTGCTAAAATTGAACTTCCAATTATTGTTCGCTTATTTCGATACTATGCTGGTTGGGCAGATAAGATTCATGGTCTTACAGTTCCAGCTGATGGGCCATATACTGTGCAAACATTGCATGAACCTATTGGTGTGGCCGGTCAGATCATTCCATGGAACTTTCCTCTTCTCATGTTTACCTGGAAGATTTGCCCAGCATTGGCCTGTGGTAACACTGTTGTGATCAAAACAGCTGAGCAGACTCCTTTATCTGCTCTCTACGCATCAAAGTTGCTTCATGAGGCTGGACTTCCTCCTGGTGTGTTGAACGTCATATCTGGTTTTGGTCCAACTGCTGGTGCTGCCATTGCCAGTCACATGAACGTAGACAAGCTTGCTTTCACTGGTTCAACCGATACTGGGAAAATTGTCCTTGAACTGGCAGCTAAAAGCAATCTTAAGCCTGTTACTCTGGAGCTTGGTGGCAAATCCCCTTTTATTGTATGTGAAGATGCTGATGTAGATGAGGCTGTTGAGCTAGCACACTTTGCATTATTCTTTAACCAGGGACAATGCTGCTGTGCTGGGTCAAGAACATTTGTACACGAACGTGTGTACGATGAATTTGTTGAGAAAGCAAGGGCACGTGCTTTGAAACGTGCTGTTGGTGATCCATTCAAAGTTGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTCAGAAAATATTGAAGTATATTAGATCTGGTGTTGAAAGTGGAGCTACACTTGAAACTGGAGGAGATAGATTTGGCAACTCCGGCTTCTATGTTCAACCCACTGTCTTCTCAAATGTTAAGGATGATATGCTGATTGCAAAGGACGAGATCTTTGGCCCAGTGCAATCCATATTAAAATTCAAGGACATTGATGAGGTGATTGAAAGAGCAAATAAGACACAGTATGGGCTTGCAGCAGGAGTGTTCACAAAAAACATTGACACAGCAAACACATTGAGCAGAGCATTGAAAGTTGGAACAGTGTGGGTGAACTGCTTTGACACATTTGATGCAGCAATTCCCTTTGGAGGGTACAAAATGAGTGGTCAAGGAAGAGAAAAAGGAGAATACAGTCTCAAAAATTACTTGCAAGTGAAGGCTGTTGTCACACCCTTGAAGAACCCATCTTGGCTTTGA 1617 0.4372 MASSMRISRLLSRSFLSATTSSLFSRGGSGGLGGGLSKFSTAAATEEPIKPAVRVEHTQLLIDGKFVNSATGKTFPTLDPRTGDVIAHIAEGDHEDVDRAVVVARKAFDHGPWPKMTAYERQKILLRAADLIEKHTDQIAALETWDTGKPYEQVAKIELPIIVRLFRYYAGWADKIHGLTVPADGPYTVQTLHEPIGVAGQIIPWNFPLLMFTWKICPALACGNTVVIKTAEQTPLSALYASKLLHEAGLPPGVLNVISGFGPTAGAAIASHMNVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKARARALKRAVGDPFKVGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFGNSGFYVQPTVFSNVKDDMLIAKDEIFGPVQSILKFKDIDEVIERANKTQYGLAAGVFTKNIDTANTLSRALKVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPSWL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9590g00001 538 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 62 320 - -
Vium9590g00001 538 CDD ALDH_F2BC 55 530 - -
Vium9590g00001 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
Vium9590g00001 538 Pfam Aldehyde dehydrogenase family 67 528 IPR015590 GO:0016491
Vium9590g00001 538 FunFam Aldehyde dehydrogenase, putative 500 526 - -
Vium9590g00001 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620
Vium9590g00001 538 SUPERFAMILY ALDH-like 54 532 IPR016161 GO:0016491
Vium9590g00001 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 42 528 - -
Vium9590g00001 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 526 IPR016162 GO:0016491
Vium9590g00001 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491
Vium9590g00001 538 FunFam Mitochondrial aldehyde dehydrogenase 2 310 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9590g00001 Vium-Chr9590 22469 26760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9590g00001 3 538 Aldehyde Dehydrogenase Gene Family AT3G48000 75.465 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9590g00001 K00128 - gmx:100786773 943.725