Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9571g00079 ATGGCCAACGAAAACCCAGGCGACGAGGTTGTGTGCGTGACCGGCGCCAACGGTTTCATCGGTTCGTGGCTGGTTCGGACCCTCTTGGAGAACCAAAGCCATAGCTACACCATCCATGCTGCCATCTTCCCCGGTTCCGACGCCTCTCATCTCTTCACCCTCCACCCCGCCGCCGCCTCCCGCATCACCGTCTTCCCCGCCGACCTCCTCGACGCCGCCGCCGTCTTCCGCGCCGTCGCGGGATGCTCTGGCGTCTTCCACGTTGCGTCCCCCTGCACGCTGGAGGACCCCGCGGACCCTCAAAGCGAGCTTCTAGAACCCGCGGTGCAGGGCACGCTGAACGTGCTCGAAGCCGCGAGGAGCGTGGGCGTGCGGCGCGTGGTGCTCACGTCCTCGATCTCGGCAATGGTGCCGAACCCGGGGTGGCCGGCGGGAAGGGTAGTGGACGAGGAGTCGTGGACAGACGTGGAGTTCTGCAGGGCGAAGGGGAAGTGGTACCCTGTGGCGAAGACAGAGGCAGAGAGGGCGGCGTGGAAGTTCGAGGGCAGTGTCGAGGTAGTGGCGGTCCTTCCGGCGACGTGTCTGGGTCCGTTGCTGCAGCCGGAGCTGAACGCGAGCTCCGGCGTGCTGCAGAGGCTTATGATGGGGTCGAAGGAGACGCAGGAGTATCACTGGTTGGGTGCGGTGCATGTGAAGGACGTTGCTAAAGCTCATGTGTTGCTCTACGAAACTCCCTCTGCTTCTGGTAGATATCTCTGCACCAATGGTATCTATCAGTTTTCTGGTTTTGCTGCCTCTGTCTCTGAATTGTACCCTGAATTCCCTATCCACAGGTTCCCAGAAGAAACACAACCTGGCCTGGTTCCTTGTAATGGTGCAGCAAGGAGACTAATAGACTTGGGCCTTGTCTTCACACCAGTTCAAGATGCTGTGAGAGAAGCAGCGGAGAGCCTTATAGCCAAAGGGTTCCTGCAGCGCTCACCCTCACAGAGTAATTAG 999 0.6036 MANENPGDEVVCVTGANGFIGSWLVRTLLENQSHSYTIHAAIFPGSDASHLFTLHPAAASRITVFPADLLDAAAVFRAVAGCSGVFHVASPCTLEDPADPQSELLEPAVQGTLNVLEAARSVGVRRVVLTSSISAMVPNPGWPAGRVVDEESWTDVEFCRAKGKWYPVAKTEAERAAWKFEGSVEVVAVLPATCLGPLLQPELNASSGVLQRLMMGSKETQEYHWLGAVHVKDVAKAHVLLYETPSASGRYLCTNGIYQFSGFAASVSELYPEFPIHRFPEETQPGLVPCNGAARRLIDLGLVFTPVQDAVREAAESLIAKGFLQRSPSQSN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9571g00079 332 Gene3D - 2 332 - -
Vium9571g00079 332 FunFam Cinnamoyl-CoA reductase 1 4 331 - -
Vium9571g00079 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 317 IPR036291 -
Vium9571g00079 332 Pfam NAD dependent epimerase/dehydratase family 11 247 IPR001509 -
Vium9571g00079 332 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 311 - -
Vium9571g00079 332 CDD FR_SDR_e 11 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9571g00079 Vium-Chr9571 403287 405182 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9571g00079 9 324 Monolignol Biosynthesis Gene Families AT2G02400 64.890 4.51e-157 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9571g00079 - - vra:106775739 650.973