Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9571g00005 CATGATTGTTTGCACCACGAATCCGATGAAGAATGCCGTTGCGGTTTCATTCAGGTGTATGACTGCAGCGCCAATGAAATAAACAATGAAGATTCAGAGGAGCTATTTGAGATCAATCTGAAGGAATCATTGGAGACAATATCAGAAGACTGTGAGAGCAGCGTGTTCTCTTTTGACATTCACAACAACAACGACACAGATGTTGTTCATGTGGCAGTAGACCACGTTGGAGAATCAAGCATGGAAGCCCTTTTATGGACTTTGAACCATGCTGTCACACCCTCTACCACTGTCTATCTCATACACGTTTTTCCAGAAATCAGGCTCATCCCAAGTCCATTTGGAAAATTTCCAAGGAATCGTGTAAATGCAGAGTATGTTAACTTTCACTTGACTCAACAGAAAGGCAAGAAAAAATTGCTCCTTCAAGAGTTCATTGACTTGTGCTTTGATTCAAAGGTTAAGGTGGAAGTGAATGTTGTAGAGGGTGACAACGTTGCCAAAGCAATAACAGAGCAAGTTAGAGATCATGATATAAGAAAATTAGTGATTGGAATCACCAAATCTAATTTAAGCAAATCCGTGTCCAGAAGGAGAAATGGCATAGCAGATAAGGTCCTCAGAAATGTACCAGAAATCTGTGATGTTAAAATAATATGCGATGGAAAAGAAGTAACAGATCAAATGATTAGCAGTTTCAGAGTTGCACATGAAGAGAATGAATCATGTGGTTTTGTTCCTCTTATGCGTTTTGTGTCCAATCCCATATGGCTATTTAGACCCAGATTTTGA 792 0.3952 HDCLHHESDEECRCGFIQVYDCSANEINNEDSEELFEINLKESLETISEDCESSVFSFDIHNNNDTDVVHVAVDHVGESSMEALLWTLNHAVTPSTTVYLIHVFPEIRLIPSPFGKFPRNRVNAEYVNFHLTQQKGKKKLLLQEFIDLCFDSKVKVEVNVVEGDNVAKAITEQVRDHDIRKLVIGITKSNLSKSVSRRRNGIADKVLRNVPEICDVKIICDGKEVTDQMISSFRVAHEENESCGFVPLMRFVSNPIWLFRPRF 263
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vium9571g00005 263 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 71 218 - -
Vium9571g00005 263 Gene3D HUPs 57 219 IPR014729 -
Vium9571g00005 263 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 23 237 - -
Vium9571g00005 263 Pfam Universal stress protein family 69 211 IPR006016 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vium9571g00005 Vium-Chr9571 29162 30709 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9571g00005 69 222 U-box Gene Family AT2G45910 27.215 1.72e-12 65.1