Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9571g00004 ATGTCTCAAACCTTAACTCACACCATGCACCGTTCACCTGAACCTCTGTCCCTTCAGGTGGACAACAACCACTCTGGAAGAAGCACCACCGTCACTGAGATAGAGGAAGATAACTCCTCAGACTTCCCCTTCAACAATGATTCTCTTGTTACCATTAACGAACAAGACAAGGAGGAGGAAGACACTGTCTATGTCGCCGTCGGAAAGAGCCCCAGCAGCATCGAAGCCTTGTCATGGACCCTCACCAACTTCACCACTCCATCTACCATTCTCTATCTCATACACGTTTTCCCAGAGATCAAGCACCTTCCAAATCCATTGGGAGTTGGAGTGATTCCGAAGGATCAAGTGAGTCCTGAGCAGGTAGAGAGCTACATGGCACAAGAAAGAGGCAAGAGAAGAGAGCTCCTTAACAAATTCCTGCAATTATGTTCTGCTTCCAAGGTTAAGGTCGAAACAATCTTGATTGAGAGTGACTTGATTGCAAAGGCTATCATCGACCTCATTCCCATTCTTCAAATAAGAAAACTAGTGATTGGAGCAAGCAAATCTCAAATACGAAAATTGAGATCAAAGAAAGGGAGTGGCATAGCTGATCAGATACTTCAGAATGCTCCGGAAAGTTGCAATGTGAGTATTGTATGTGAAGGAAAGGAAGTAAATGAACAGATAGCCGCTGCCATTGCCACTGATACTTCCATGTCCCAGAAAAACAAGCATCAGCAAAATGCTTCGGTTTCGTGTGTTTGTTTCAACTTTTAA 762 0.4423 MSQTLTHTMHRSPEPLSLQVDNNHSGRSTTVTEIEEDNSSDFPFNNDSLVTINEQDKEEEDTVYVAVGKSPSSIEALSWTLTNFTTPSTILYLIHVFPEIKHLPNPLGVGVIPKDQVSPEQVESYMAQERGKRRELLNKFLQLCSASKVKVETILIESDLIAKAIIDLIPILQIRKLVIGASKSQIRKLRSKKGSGIADQILQNAPESCNVSIVCEGKEVNEQIAAAIATDTSMSQKNKHQQNASVSCVCFNF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9571g00004 253 MobiDBLite consensus disorder prediction 1 45 - -
Vium9571g00004 253 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 62 212 - -
Vium9571g00004 253 CDD STK_N 62 217 - -
Vium9571g00004 253 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 21 252 - -
Vium9571g00004 253 Gene3D HUPs 49 227 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9571g00004 Vium-Chr9571 25709 27494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9571g00004 66 218 Plant U-box Gene Family AT5G57035 32.680 3.07e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9571g00004 - - gmx:100781056 372.474