Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9534g00001 ATGAATCTTGTAAGTTACGAATTTGTGGCTTGCCAAGATAAAAAGAAAGGGGTTCTCATTCTCAGCGAATTTGCTGGTGCTGCACAGTCACTTGGCGCTGGGGCAATTCTGGTCAACCCTTGGAACATCACGGAAGTTGCTGCTGCAATTGCCAAGGCTCTGAATATGAAATCAAAAGAACGAGAGAAGAGACATAAGCATAACTTTAAACATGTAACAACCCACACTGCTCAGGAATGGGCAGAAACTTTTGTGAGGTATAAATGTAGATAG 273 0.4249 MNLVSYEFVACQDKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAKALNMKSKEREKRHKHNFKHVTTHTAQEWAETFVRYKCR 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9534g00001 90 Gene3D Glycogen Phosphorylase B; 75 86 - -
Vium9534g00001 90 Pfam Glycosyltransferase family 20 1 86 IPR001830 GO:0003824|GO:0005992
Vium9534g00001 90 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 86 - -
Vium9534g00001 90 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 85 IPR001830 GO:0003824|GO:0005992
Vium9534g00001 90 Gene3D Glycogen Phosphorylase B; 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9534g00001 Vium-Chr9534 16 1023 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9534g00001 1 85 Trehalose Biosynthesis Gene Families AT1G78580 87.059 6.15e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9534g00001 K16055 - vum:124848589 184.882