Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9526g00001 ATGGTTGGCCCTGCCTTAAAGAGGAGCATTGGGTTGAAAACTATGGACAGGGAATTGATGACCCAGGGTGAAAAACAAGGAACTGATACAGTGACATCTACGGTAGAATTGGGCAATGGCCGAGTACTTCACAACCCAGACATGTTATGTTCAAAGGCAAAAAGAAGAGTTAGAGAGGCTTATAGGAAAAAAGAGAACCTTGTGGAAGAGTCAGACATAGCGAAACTCCCTTATTTGCAGGCAATAGTGAAAGAGACTTTCAGGTTGCACCCTGCAGTTCCACTTTTGCTACCCAGAAAAGCTGAAGTGGAATTTGAGATGCATGGATACACAATTCCAAAGGGTGCACAAGTGTTGATTAATGTGTGGGCCATAGGAAGGGACCCTAATTTGTGGGAGAAACCTAGATTGTTTTGGCCTGAGAGGTTTTTGGAATCAGAAATAGACTTCAAAGGAAGCGTTTTGAGCTTACCCATTTGGTGGTGGGAGGAGAATATGCCCTGGTTTGCTATTGGCCATAAGGTTGGTGTTCTTGATGTTGGGATTGTTCATCAATTCCTTGATTGGGAGCTTCAGGATATTCAACCAGAG 591 0.4382 MVGPALKRSIGLKTMDRELMTQGEKQGTDTVTSTVELGNGRVLHNPDMLCSKAKRRVREAYRKKENLVEESDIAKLPYLQAIVKETFRLHPAVPLLLPRKAEVEFEMHGYTIPKGAQVLINVWAIGRDPNLWEKPRLFWPERFLESEIDFKGSVLSLPIWWWEENMPWFAIGHKVGVLDVGIVHQFLDWELQDIQPE 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9526g00001 197 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 27 193 - -
Vium9526g00001 197 PRINTS E-class P450 group I signature 121 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9526g00001 197 PRINTS E-class P450 group I signature 80 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9526g00001 197 Gene3D Cytochrome P450 26 173 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9526g00001 197 Pfam Cytochrome P450 27 151 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium9526g00001 197 Coils Coil 50 70 - -
Vium9526g00001 197 SUPERFAMILY Cytochrome P450 27 153 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9526g00001 Vium-Chr9526 5215 5929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9526g00001 27 191 Cytochrome P450 AT2G45570 46.988 2.03e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9526g00001 - K23810 vum:124848581 410.223