Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium951g00007 ATGAGTTTGAGTATGAGTTTGTGTGGTAGTTATAGTCCTCAGTTTCCATGTCGCAGAATTGCAAGCTGCAATCTTCACAACGATGGCAGCCATGTTATTCCCATCAATACGCACCAAAAGCCTTCGGAACCTAAAAATTGTCTTCAGCCAAAATGGAAGATTAATGGCAATAACTTGACCACATGGATTGGAGTCATGACAGCAGCACACTTGGTTGCTCCAGTTGCTGCAAAAGCTGAAGTAGCTTCTTCTATTTATGCTTTGGCTGATGGAAGCCTCAGTGACTGGTTTGGAGGCTTTCTATTTTCAGCTGGACAACAGGCAAACGAAGCTGTTCAGGGCCAACTATCATCTCTCAGTTTCACTAGTTTGGCTGTAATTTATGGGGCAGGGCTTGTAACCAGCCTCTCTCCCTGTACACTTAGTGTCTTACCGCTGACCCTTGGTTACATCGGTGCATTTGGCTCTGGCAAAAGCAAAGCAGAGGTAGTTGGAGATTCCATTGCGTTTTCCTTGGGTCTTGCAACCACATTAGCACTGTTGGGTGTAGGAGCTTCATTTGCAGGAAAAGCTTATGGACAAATTGGACAAGGATTGCCCTTGGCTGCTTCTGGTTTGGCAATAATTATGGGGCTGAATCTTCTCGAGATAATTGAATTACGGCTGCCGTCATTCTTTGACAGTTTTGATCCACGTGCAGCTGCTGCCAATTTTCCATCCAGTGTGCAAGCATACCTGGCTGGGCTTACATTTGCATTAGCTGCCTCACCTTGTAGTACACCTGTTCTGGCAACCCTTCTGGGCTATGTTGCTGCATCCAAGGATCCTGTGATTGGAGGCAGCTTGCTTTTGACATACACAACTGGTTATGTTTCTCCCTTACTATTGGCTGCGTCTTTTGCTGGAGCATTACAAAGCTTGCTTTCATTTCGCAAGTTTTCAGCATGGATAAATCCTATAAGCGGAGCAATGTTGTTAGGTGGTGGTGTATATACTTTCTTGGATAGGCTGTTCCCAGCTACAATGGTGATGTAG 1035 0.4531 MSLSMSLCGSYSPQFPCRRIASCNLHNDGSHVIPINTHQKPSEPKNCLQPKWKINGNNLTTWIGVMTAAHLVAPVAAKAEVASSIYALADGSLSDWFGGFLFSAGQQANEAVQGQLSSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGDSIAFSLGLATTLALLGVGASFAGKAYGQIGQGLPLAASGLAIIMGLNLLEIIELRLPSFFDSFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPATMVM 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium951g00007 344 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 118 343 - -
Vium951g00007 344 Pfam Cytochrome C biogenesis protein transmembrane region 128 334 IPR003834 GO:0016020|GO:0017004
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium951g00007 Vium-Chr951 22373 30208 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium951g00007 1 344 Chloroplast and Mitochondria Gene Families AT5G54290 67.778 1.06e-142 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium951g00007 - - pvu:PHAVU_011G155100g 633.254