Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium951g00005 ATGAGTTTGAGTATGAGTTTGTGTGGTAGTTATAGTCCTCAGTTTCCATGTCGCAGAATTGCAAGCTGCAATCTTCACAACGATGGCAGCCATGTTATTCCCATCAATACGCACCAAAAGCCTTCGGAACCTAAAAATTGTCTTCAGCCAAAATGGAAGATTAATGGCAATAACTTGACCACATGGATTGGAGTCATGACAGCACACTTGGTTGCTCCAGTTGCTGCAAAAGCTGAAGTAGCTTCTTCTATTTATGCTTTGGCTGATGGAAGCCTCAGTGACTGGTTTGGAGGCTTTCTATTTTCAGCTGGACAACAGGCAAACGAAGCTGTTCAGGGCCAACTATCATCTCTCAGTTTCACTAGTTTGGCTGTAATTTATGGGGCAGGGCTTGTAACCAGCCTCTCTCCCTGTACACTTAGTGTCTTACCGCTGACCCTTGGTTACATCGGTGCATTTGGCTCTGGCAAAAGCAAAGCAGAGGTAGTTGGAGATTCCATTGCGTTTTCCTTGGGTCTTGCAACCACATTAGCACTGTTGGGTGTAGGAGCTTCATTTGCAGGAAAAGCTTATGGACAAATTGGACAAGGATTGCCCTTGGCTGCTTCTGGTTTGGCAATAATTATGGGGCTGAATCTTCTCGAGATAATTGAATTACGGCTGCCGTCATTCTTTGACAGTTTTGATCCACGTGCAGCTGCTGCCAATTTTCCATCCAGTGTGCAAGCATACCTGGCTGGGCTTACATTTGCATTAGCTGCCTCACCTTGTAGTACACCTGTTCTGGCAACCCTTCTGGGCTATGTTGCTGCATCCAAGGATCCTGTGATTGGAGGCAGCTTGCTTTTGACATACACAACTGGTTATGTTTCTCCCTTACTATTGGCTGCGTCTTTTGCTGGAGCATTACAAAGCTTGCTTTCATTTCGCAAGTTTTCAGCATGGATAAATCCTATAAGCGGAGCAATGTTGTTAGGTGGTGGTGTATATACTTTCTTGGATAGGCTGTTCCCAGCTACAATGGTGATGTAG 1032 0.4525 MSLSMSLCGSYSPQFPCRRIASCNLHNDGSHVIPINTHQKPSEPKNCLQPKWKINGNNLTTWIGVMTAHLVAPVAAKAEVASSIYALADGSLSDWFGGFLFSAGQQANEAVQGQLSSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGDSIAFSLGLATTLALLGVGASFAGKAYGQIGQGLPLAASGLAIIMGLNLLEIIELRLPSFFDSFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPATMVM 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium951g00005 343 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 117 342 - -
Vium951g00005 343 Pfam Cytochrome C biogenesis protein transmembrane region 127 333 IPR003834 GO:0016020|GO:0017004
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium951g00005 Vium-Chr951 22373 30209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium951g00005 1 343 Chloroplast and Mitochondria Gene Families AT5G54290 67.778 1.48e-142 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium951g00005 - - pvu:PHAVU_011G155100g 630.172