Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium951g00004 ATGAGTTTGAGTATGAGTTTGTGTGGTAGTTATAGTCCTCAGTTTCCATGTCGCAGAATTGCAAGCTGCAATCTTCACAACGATGGCAGCCATGTTATTCCCATCAATACGCACCAAAAGCCTTCGGAACCTAAAAATTGTCTTCAGCCAAAATGGAAGATTAATGGCAATAACTTGACCACATGGATTGGAGTCATGACAGGTACAGCACACTTGGTTGCTCCAGTTGCTGCAAAAGCTGAAGTAGCTTCTTCTATTTATGCTTTGGCTGATGGAAGCCTCAGTGACTGGTTTGGAGGCTTTCTATTTTCAGCTGGACAACAGGCAAACGAAGCTGTTCAGGGCCAACTATCATCTCTCAGTTTCACTAGTTTGGCTGTAATTTATGGGGCAGGGCTTGTAACCAGCCTCTCTCCCTGTACACTTAGTGTCTTACCGCTGACCCTTGGTTACATCGGTGCATTTGGCTCTGGCAAAAGCAAAGCAGAGGTAGTTGGAGATTCCATTGCGTTTTCCTTGGGTCTTGCAACCACATTAGCACTGTTGGGTGTAGGAGCTTCATTTGCAGGAAAAGCTTATGGACAAATTGGACAAGGATTGCCCTTGGCTGCTTCTGGTTTGGCAATAATTATGGGGCTGAATCTTCTCGAGATAATTGAATTACGGCTGCCGTCATTCTTTGACAGTTTTGATCCACGTGCAGCTGCTGCCAATTTTCCATCCAGATCCTGTGATTGGAGGCAGCTTGCTTTTGACATACACAACTGGTTATGTTTCTCCCTTACTATTGGCTGCGTCTTTTGCTGGAGCATTACAAAGCTTGCTTTCATTTCGCAAGTTTTCAGCATGGATAAATCCTATAAGCGGAGCAATGTTGTTAGGTGGTGGTGTATATACTTTCTTGGATAG 909 0.4444 MSLSMSLCGSYSPQFPCRRIASCNLHNDGSHVIPINTHQKPSEPKNCLQPKWKINGNNLTTWIGVMTGTAHLVAPVAAKAEVASSIYALADGSLSDWFGGFLFSAGQQANEAVQGQLSSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGDSIAFSLGLATTLALLGVGASFAGKAYGQIGQGLPLAASGLAIIMGLNLLEIIELRLPSFFDSFDPRAAAANFPSRSCDWRQLAFDIHNWLCFSLTIGCVFCWSITKLAFISQVFSMDKSYKRSNVVRWWCIYFLG 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium951g00004 302 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 119 242 - -
Vium951g00004 302 Pfam Cytochrome C biogenesis protein transmembrane region 129 222 IPR003834 GO:0016020|GO:0017004
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium951g00004 Vium-Chr951 22373 30211 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium951g00004 68 241 Chloroplast and Mitochondria Gene Families AT5G54290 76.374 7.47e-79 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium951g00004 - - pvu:PHAVU_011G155100g 437.187