Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium951g00003 ATGAGTTTGAGTATGAGTTTGTGTGGTAGTTATAGTCCTCAGTTTCCATGTCGCAGAATTGCAAGCTGCAATCTTCACAACGATGGCAGCCATGTTATTCCCATCAATACGCACCAAAAGCCTTCGGAACCTAAAAATTGTCTTCAGCCAAAATGGAAGATTAATGGCAATAACTTGACCACATGGATTGGAGTCATGACAGGTACAGCACACTTGGTTGCTCCAGTTGCTGCAAAAGCTGAAGTAGCTTCTTCTATTTATGCTTTGGCTGATGGAAGCCTCAGTGACTGGTTTGGAGGCTTTCTATTTTCAGCTGGACAACAGGCAAACGAAGCTGTTCAGGGCCAACTATCATCTCTCAGTTTCACTAGTTTGGCTGTAATTTATGGGGCAGGGCTTGTAACCAGCCTCTCTCCCTGTACACTTAGTGTCTTACCGCTGACCCTTGGTTACATCGGTGCATTTGGCTCTGGCAAAAGCAAAGCAGAGGTAGTTGGAGATTCCATTGCGTTTTCCTTGGGTCTTGCAACCACATTAGCACTGTTGGGTGTAGGAGCTTCATTTGCAGGAAAAGCTTATGGACAAATTGGACAAGGATTGCCCTTGGCTGCTTCTGGTTTGGCAATAATTATGGGGCTGAATCTTCTCGAGATAATTGAATTACGGCTGCCGTCATTCTTTGACAGTTTTGATCCACGTGCAGCTGCTGCCAATTTTCCATCCAGTGTGCAAGCATACCTGGCTGGGCTTACATTTGCATTAGCTGCCTCACCTTGTAGTACACCTGTTCTGGCAACCCTTCTGGGCTATGTTGCTGCATCCAAGGATCCTGTGATTGGAGGCAGCTTGCTTTTGACATACACAACTGGTTATGTTTCTCCCTTACTATTGGCTGCGTCTTTTGCTGGAGCATTACAAAGCTTGCTTTCATTTCGCAAGTTTTCAGCATGGATAAATCCTATAAGCGGAGCAATGTTGTTAGGTGGTGGTGTATATACTTTCTTGGATAGGCTGTTCCCAGCTACAATGGTGATGTAG 1038 0.4528 MSLSMSLCGSYSPQFPCRRIASCNLHNDGSHVIPINTHQKPSEPKNCLQPKWKINGNNLTTWIGVMTGTAHLVAPVAAKAEVASSIYALADGSLSDWFGGFLFSAGQQANEAVQGQLSSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGDSIAFSLGLATTLALLGVGASFAGKAYGQIGQGLPLAASGLAIIMGLNLLEIIELRLPSFFDSFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPATMVM 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium951g00003 345 Pfam Cytochrome C biogenesis protein transmembrane region 129 335 IPR003834 GO:0016020|GO:0017004
Vium951g00003 345 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 119 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium951g00003 Vium-Chr951 22373 30295 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium951g00003 68 345 Chloroplast and Mitochondria Gene Families AT5G54290 81.533 8.57e-143 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium951g00003 - - pvu:PHAVU_011G155100g 630.172