Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9505g00012 ATGAAGGAGTTATCTGAGAACCAGACTATTGCTGTCCATGGTATAGCTGGTGCTGGGTCAGTGGTTTTTGCCACTGCCTTCACTTATCCACTCGACACTATGAAAGTTCTTATTCAGGTTGGTTCCACTACTGGTAAACAATTGGACGCTGCTCAGGCTTTGTCGAGAGTAGTCTTTCTGTCGGGTAATGCAGGTTTGTACAGTGGTTTTGGCTGGTTGGCAGTTGGAAGGATTTTTGGTCTGGGAGCACGATTTGGGGTTTATGAAATTCTGACTGCCTTTTCTAAAGATGGTCGGGAAGATAATTATTTGTTTCCTTCCGAGGCACTTTTGGCTGGCATGGCATCTGGTGCCATTGAGACAGTCGTAAGCTCTCCATTTGAACTCATCAAGCTTCGCAAGCAGGTTACCTCTGCTTCATATGCTCCGAGCCCCAACTTTGCTCTGGAAAATGGGACTCGTAAACCTTTAATTGCAAGGTTACTTAATGGCTGTTATCCAGACAAAAGGTCCTTGGACCTGTATACTCGTCTTATCTCCACCTTAACAACAAAAAATACGAACATGACTAGTGCTTTACTAGAGTATCCATGGACAATGACAGGATCTGGGAAGCCACCAGCTGTTTCCAGTGTCAGGAGACCATCTGACATTATAACTTTAGAAGGCTGGAGCACTTTATGGAGAGGTATTCGTTCTGGAATTGCACGAGATTCTGTGTTTGGGGGCATATTTTTTTCAACCTGGCAATTTCTTCACCAAGCCATGCTAGATTGGAAGGCTGTAGGGATGAATCCTCCACCCAGGTTAAATGAAGACGTTGGTCCATTGTCTCCTTTCACTGTTAGTCTTACTGCAGGATTCTCAGCTTCTGTTGCTGCTGCTGCTTCTCATGGTTTTGATACTTCAAGAAGTAGATCACAATGTAATGTGCTTCCAAAGCACATGTCAATGGAGAGAAAGATTTTGAAATGGAAGCGACCAGGAAACAAGTTTGAAAGAATGACTGGAATCCATCCTTTAGACAGGAATGTCTTGTTCCACGGTATTGGTTGGCGGATGGCTCGCACTGGGTTGGCGTCATCAATGATTGTAGGAAGTTATTTATTTGTTGCTGATCAGCTTACTTCTATTTTGACTTAA 1143 0.4383 MKELSENQTIAVHGIAGAGSVVFATAFTYPLDTMKVLIQVGSTTGKQLDAAQALSRVVFLSGNAGLYSGFGWLAVGRIFGLGARFGVYEILTAFSKDGREDNYLFPSEALLAGMASGAIETVVSSPFELIKLRKQVTSASYAPSPNFALENGTRKPLIARLLNGCYPDKRSLDLYTRLISTLTTKNTNMTSALLEYPWTMTGSGKPPAVSSVRRPSDIITLEGWSTLWRGIRSGIARDSVFGGIFFSTWQFLHQAMLDWKAVGMNPPPRLNEDVGPLSPFTVSLTAGFSASVAAAASHGFDTSRSRSQCNVLPKHMSMERKILKWKRPGNKFERMTGIHPLDRNVLFHGIGWRMARTGLASSMIVGSYLFVADQLTSILT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9505g00012 380 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 14 372 - -
Vium9505g00012 380 SUPERFAMILY Mitochondrial carrier 9 366 IPR023395 -
Vium9505g00012 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 94 IPR018108 -
Vium9505g00012 380 Pfam Mitochondrial carrier protein 108 256 IPR018108 -
Vium9505g00012 380 Pfam Mitochondrial carrier protein 9 93 IPR018108 -
Vium9505g00012 380 Gene3D Mitochondrial carrier domain 10 378 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9505g00012 Vium-Chr9505 73847 77599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9505g00012 29 258 Antiporters AT1G79900 24.151 3.80e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9505g00012 - - gmx:100813634 624.78