Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9505g00011 ATGAAGGAGTTATCTGAGAACCAGACTATTGCTGTCCATGGTATAGCTGGTGCTGGGTCAGTGGTTTTTGCCACTGCCTTCACTTATCCACTCGACACTATGAAAGTTCTTATTCAGGTTGGTTCCACTACTGGTAAACAATTGGACGCTGCTCAGGCTTTGTCGAGAGTAGTCTTTCTGTCGGGTAATGCAGGTTTGTACAGTGGTTTTGGCTGGTTGGCAGTTGGAAGGATTTTTGGTCTGGGAGCACGATTTGGGGTTTATGAAATTCTGACTGCCTTTTCTAAAGATGGTCGGGAAGATAATTATTTGTTTCCTTCCGAGGCACTTTTGGCTGGCATGGCATCTGGTGCCATTGAGACAGTCGTAAGCTCTCCATTTGAACTCATCAAGCTTCGCAAGCAGGTTACCTCTGCTTCATATGCTCCGAGCCCCAACTTTGCTCTGGAAAATGGGACTCGTAAACCTTTAATTGCAAGGTTACTTAATGGATCTGGGAAGCCACCAGCTGTTTCCAGTGTCAGGAGACCATCTGACATTATAACTTTAGAAGGCTGGAGCACTTTATGGAGAGGTATTCGTTCTGGAATTGCACGAGATTCTGTGTTTGGGGGCATATTTTTTTCAACCTGGCAATTTCTTCACCAAGCCATGCTAGATTGGAAGGCTGTAGGGATGAATCCTCCACCCAGGTTAAATGAAGACGTTGGTCCATTGTCTCCTTTCACTGTTAGTCTTACTGCAGGATTCTCAGCTTCTGTTGCTGCTGCTGCTTCTCATGGTTTTGATACTTCAAGAAGTAGATCACAATGTAATGTGCTTCCAAAGCACATGTCAATGGAGAGAAAGATTTTGAAATGGAAGCGACCAGGAAACAAGTTTGAAAGAATGACTGGAATCCATCCTTTAGACAGGAATGTCTTGTTCCACGGTATTGGTTGGCGGATGGCTCGCACTGGGTTGGCGTCATCAATGATTGTAGGAAGTTATTTATTTGTTGCTGATCAGCTTACTTCTATTTTGACTTAA 1029 0.4422 MKELSENQTIAVHGIAGAGSVVFATAFTYPLDTMKVLIQVGSTTGKQLDAAQALSRVVFLSGNAGLYSGFGWLAVGRIFGLGARFGVYEILTAFSKDGREDNYLFPSEALLAGMASGAIETVVSSPFELIKLRKQVTSASYAPSPNFALENGTRKPLIARLLNGSGKPPAVSSVRRPSDIITLEGWSTLWRGIRSGIARDSVFGGIFFSTWQFLHQAMLDWKAVGMNPPPRLNEDVGPLSPFTVSLTAGFSASVAAAASHGFDTSRSRSQCNVLPKHMSMERKILKWKRPGNKFERMTGIHPLDRNVLFHGIGWRMARTGLASSMIVGSYLFVADQLTSILT 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9505g00011 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 94 IPR018108 -
Vium9505g00011 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 217 IPR018108 -
Vium9505g00011 342 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 14 334 - -
Vium9505g00011 342 Pfam Mitochondrial carrier protein 9 93 IPR018108 -
Vium9505g00011 342 Pfam Mitochondrial carrier protein 108 218 IPR018108 -
Vium9505g00011 342 Gene3D Mitochondrial carrier domain 9 340 IPR023395 -
Vium9505g00011 342 SUPERFAMILY Mitochondrial carrier 9 328 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9505g00011 Vium-Chr9505 73847 77599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9505g00011 29 330 Antiporters AT1G79900 23.026 3.31e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9505g00011 - - gmx:100813634 542.347