LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium9505g00003	ATGGAAAGCGCATGGAGCAACGGCAAGATGAAGGTCCTGAAGCCGAGGACTTCGAACGAGAACATTCCACCGATGCAGATAGACTCGGATGAGAGAAGAGGACGCTATATCCAACCGTCAGCGATGAGTCCACGGTTTCAACCGTACGCCGAAAACATCGACGCCGGTTCGCCTCTCTCGCGTTACCTGTTCGCCGGATCGCCGTTGTCTGGGAAGGTCGCTTCCGCCAGCGAGGCATTCAGCCCTCCCTCGTTCAGCGCATGGTCCACGAAAGGTCTTCCGTATTGCGGCAATAGTTCGGGGCGGAGCAGCAGCTTCGGCTCTCGCGGTAGGTTGTCGCCGTCACCGCTTTCGTCGATCGAGAACATGGAGGTCGCGTCATTCATGTCGCCGCCAATGTACCGAACGGCGGCGACTGGGGATGACGACGTTCTCGTGATGGATGACATTCTAGTGAGACCAATGTCCGGGGGAAAGAGTGGAAGGTCTTCATCCTCCTCCGGCCGCGGTTCGTCCTCTTCGTCGTCGGCGTCCAAGAGCGTGTTCAAGACAGATATTTGCAGAGCGTGGGAAGAGTCCGCTAGCTGCCGCTACACCTCCAAATGCCAGTTACACTTAAAAGAAGAGGCTCAGTCTGGTCGTCCCTCCCCGAAAAGCAAATCCAGGGCAGAGACAAGCACATCATCATCTGTGAGAGCAGGATCAAGCACGCATGGCCCAAGCACCGACATTGTTGAACAGCAGGATGCAGGAGCGGAGTCTGATCAGCAAGGCGCAACTTCCCAACCAACTTCACCCGAATCTGCCAATAACTGGTCACCCCTGGATGATGGTATTGAGGTTGTACTCCCAGGTTCAGATGAAGCTCCATCAAGAGAAGAAATTCATGCCTATATTTCCAGTCTTAAACATGGCCGGACTGCTAAAAGGAGACTGCCGGTATTTGAAGCAATTACCAAAGGGACTTGA	969	0.5459	MESAWSNGKMKVLKPRTSNENIPPMQIDSDERRGRYIQPSAMSPRFQPYAENIDAGSPLSRYLFAGSPLSGKVASASEAFSPPSFSAWSTKGLPYCGNSSGRSSSFGSRGRLSPSPLSSIENMEVASFMSPPMYRTAATGDDDVLVMDDILVRPMSGGKSGRSSSSSGRGSSSSSSASKSVFKTDICRAWEESASCRYTSKCQLHLKEEAQSGRPSPKSKSRAETSTSSSVRAGSSTHGPSTDIVEQQDAGAESDQQGATSQPTSPESANNWSPLDDGIEVVLPGSDEAPSREEIHAYISSLKHGRTAKRRLPVFEAITKGT	322

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium9505g00003	322	Gene3D	-	173	212	-	-
	Vium9505g00003	322	MobiDBLite	consensus disorder prediction	1	33	-	-
	Vium9505g00003	322	MobiDBLite	consensus disorder prediction	99	118	-	-
	Vium9505g00003	322	MobiDBLite	consensus disorder prediction	216	272	-	-
	Vium9505g00003	322	MobiDBLite	consensus disorder prediction	207	290	-	-
	Vium9505g00003	322	MobiDBLite	consensus disorder prediction	148	182	-	-
	Vium9505g00003	322	MobiDBLite	consensus disorder prediction	158	182	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium9505g00003	Vium-Chr9505	25944	29515	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C3H	Vium9505g00003		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vium9505g00003	-		K18753	gmx:102665928	325.865