Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9480g00001 ATGTCCTCCGAAGACATCACCCTCGTCCCCGACCAGAGGATCGAGAACGGTCTCAGCTCCCCTCTTGTCTTCCAAGACGACCCTCTCCGCTTCAATTGCCCCACGCCGCAGCGTCGGGTCGGAGACCCGGGTCCTAAAACCCGTGAACTCGGCGCCTTCATCGACGAGAAGATGTTCATCGACCGCGACCGCTTCTTCGCCGCCCAGAACCCCGACTTCCGCCGCTACGCCGACTGCTCCTCCCGCCAAGACCCCCGCAATTGGACCGTCAACGGCACCGCCGCCACTCCCAGCGAGGACGACGAATCCGACGAGGACGACGAAGATGACGAGGATGAGGACGACGACGAAGGCGATACGGAAGTTGAAGGACTCGTCGGTGGTGGAAGCAAAAGGGAAATTATCGCTAACAACAACGGTGGCGGTGGTAATTTGCCTTCTGTTGCAAACGGGAAAGCTCACGCTTTTGTTTCTGGGAGAGAGCTGTTGGGGAAGGATGGTGGAGAGATTGGGCAGTTGGTGCTTAGCAATGTGAATGGTGGTGGTGATGAAGATCATCGGCAAGAGGGGTTAGGTAAGTCTCAGAATTCTGTTACCGTTGCTGACACTGACTGTGAGGAGTACTATTCGCACTATCTTCAAGGTGCCGATGGGGCTTCTGGTCACAAAGTTATGGTCGATGATGGTGGTTGTGGGTTTAGTGGGAGAAAGGATGCAATGTATTCTACCGAGTCAGGGGAATCACTCAGGAATATTCTTTCAGATCCTGTTACAAAGCTTGCTGCACCTGTTCTCAACCCACAACCGAGGAATCAATATCTCCTAACCTATGCATATCGTCGGGAAGAGGAGTCTCAATTCTACCGGTCACCTAAAAGAAGAAGAGAGAGATTTGATCAGGGTGGATTTGGAGACTCATCTGTTATGGAGCCATCAAGGAGTAGAGGTGTTCAGTTTCCGTATGCTGTTATGGACCGGGTTGTCATAAAGGGAAACAAAAGGACACCACAACGCTTTGTTGGGCGTGAAGCGATTGTAACAACGCAATGCCTGAATGGATGGTATGTAGTGAAGACATTGGACAATGCAGAGAGTGTAAAGTTTCAGTATCGATCACTCGCTAAAGTTTTGGATGATCCTTCAAAGCCTTCCTCCAGCAAGATGTCACCTAATTGGCTTTAG 1182 0.5152 MSSEDITLVPDQRIENGLSSPLVFQDDPLRFNCPTPQRRVGDPGPKTRELGAFIDEKMFIDRDRFFAAQNPDFRRYADCSSRQDPRNWTVNGTAATPSEDDESDEDDEDDEDEDDDEGDTEVEGLVGGGSKREIIANNNGGGGNLPSVANGKAHAFVSGRELLGKDGGEIGQLVLSNVNGGGDEDHRQEGLGKSQNSVTVADTDCEEYYSHYLQGADGASGHKVMVDDGGCGFSGRKDAMYSTESGESLRNILSDPVTKLAAPVLNPQPRNQYLLTYAYRREEESQFYRSPKRRRERFDQGGFGDSSVMEPSRSRGVQFPYAVMDRVVIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKFQYRSLAKVLDDPSKPSSSKMSPNWL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9480g00001 393 MobiDBLite consensus disorder prediction 98 122 - -
Vium9480g00001 393 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 4 258 - -
Vium9480g00001 393 MobiDBLite consensus disorder prediction 82 97 - -
Vium9480g00001 393 MobiDBLite consensus disorder prediction 288 311 - -
Vium9480g00001 393 MobiDBLite consensus disorder prediction 77 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9480g00001 Vium-Chr9480 1 4778 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9480g00001 194 393 Plant U-box Gene Family AT5G05230 44.628 2.05e-47 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9480g00001 - - gmx:100786717 572.007