Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium947g00018 ATGGGTTTCCTCCCCCTGCTCCTTCAATCATTTATCATTTCTTTATCTGTTGTGATTTGTGGTTTTACCATCATCAGAGTCTTGAGATATCATATGATTCAGAAGCCTAAACTGCCTCCAGGTCCTAAACCATGGCCTATACTTGGTAACCTTCCTCAAATGCTCTCAAACAAACCTGTATTTCGATGGATACACAATCTCATGCAAGATATGAACACTCAAATTGCATGCATTCGTCTAGGAAATGTCCATGTAATTCCAGTCACATGTCCCTCCATTGCTTGTGAGTTTTTGAGAAAACACGATGCTGAATTTTCTTCAAGACCACTGACCATGGCCACTGATATCATGTCCAGTGGTTATAAGACCATAGCTATTGTACCCTTTGGGGAGCAATGGAAGAAAATGAGGAGAATCTTCGTCAACGACTTGTTCTCCCCTCTCAGACACCACTGCTTTCAACACAAAAGGAACGAAGAAGCTGATAACATTATGTTTTATGTGTACAACAAATGCAACAATGTGAAGGATGGGGGCCTTGTGAATGTCAGAGATGTTTCACAGCACTACTGTTGCAATGTCACGAGGAAGTTGATTTTTAATACAAGTTACTTTGGAAAGGGTAGGGTGGATGGAGGGCCAGGGCCAGAAGAAGTAGAACAAGTGAATAACATTTTCACATTGCTTAAACACGTTTATGCATTTTCTGCTTCTGATTATCTTCCATTGTTGAGGGTTTTTGATTTGGATGGGCACAAGAGGAAGGTGAAGAAAGCAATGAGAACGATGGAGAAGTATCATGATCCAATGGTTGAAGAGAGAATGAAGCAATGGAAGAATGGTACAAAGAACGTTGAAGAAGACTTGTTGGATGTTCTGATCTCACTCAAAGATGACAATGATAATCCTACTCTCACAATGAAGGAAATCAAGGCCCTTACTATAGAACTTATGCTTGGAGGAGCAGACAATCCATCCAATGCAGTTGAATGTGCACTTGTAGAAATGATAAATCAGCCGGATATACTTCAGCAAGCTACTGATGAAGTAGACAAGGTTGTCGGTAAGCAAAGGATGGTGCTGGAATCAGATGTTCCAAAACTCAATTATGTAAAGGCTTGTGTGAGAGAAGCTTTTCGTCTTCATCCAGTGGTGCCTTTTAATCCTCCTCATGTCTCAAGCAATGACACAATGGTGGGAAACTATTTTATTCCGAAAGGTAGTCATGTACTTCTAAGCAGACATGGACTTGGACGAAACCCTAAAGTGTGGAATGAACCACACAACTTCAAACCTGAACGTCATGAAAAGAATGATGGATCTATGGTTGTTTTGTCAGAACCAGATTTGACGTTCATATCATTTGGCACAGGAAGACGAGGTTGTCCTGCAATCGTACTTGGCTCCACCATGACTGTGATGTTGTTGGCAAGGTTGATTCATGCCTTTTCTTGGAGTGCACCTCCAAATGTATCAAGTATCAAGATTGTTAAGTCTGCTAATGGTGGTATGCTTGCTGAGCCACTTGTGTTAGAAGCCAAACCCAGATTGGCACCAGAGTTGTATTACATATAA 1575 0.4108 MGFLPLLLQSFIISLSVVICGFTIIRVLRYHMIQKPKLPPGPKPWPILGNLPQMLSNKPVFRWIHNLMQDMNTQIACIRLGNVHVIPVTCPSIACEFLRKHDAEFSSRPLTMATDIMSSGYKTIAIVPFGEQWKKMRRIFVNDLFSPLRHHCFQHKRNEEADNIMFYVYNKCNNVKDGGLVNVRDVSQHYCCNVTRKLIFNTSYFGKGRVDGGPGPEEVEQVNNIFTLLKHVYAFSASDYLPLLRVFDLDGHKRKVKKAMRTMEKYHDPMVEERMKQWKNGTKNVEEDLLDVLISLKDDNDNPTLTMKEIKALTIELMLGGADNPSNAVECALVEMINQPDILQQATDEVDKVVGKQRMVLESDVPKLNYVKACVREAFRLHPVVPFNPPHVSSNDTMVGNYFIPKGSHVLLSRHGLGRNPKVWNEPHNFKPERHEKNDGSMVVLSEPDLTFISFGTGRRGCPAIVLGSTMTVMLLARLIHAFSWSAPPNVSSIKIVKSANGGMLAEPLVLEAKPRLAPELYYI 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium947g00018 524 FunFam Cytochrome P450 9 31 520 - -
Vium947g00018 524 SUPERFAMILY Cytochrome P450 39 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00018 524 CDD CYP79 73 517 - -
Vium947g00018 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00018 524 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00018 524 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00018 524 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00018 524 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00018 524 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00018 524 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00018 524 Gene3D Cytochrome P450 32 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00018 524 Pfam Cytochrome P450 39 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00018 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Vium947g00018 524 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 12 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium947g00018 Vium-Chr947 209639 212146 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium947g00018 38 522 Cytochrome P450 AT5G05260 54.786 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium947g00018 - K14984 vra:106774791 959.133