Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium947g00008 ATGGTTATGGGGATATCCTTCTTTGTCCTATTTTCATCCACTCTGAGTCTAGCTTTTCTACTCTCAAAATGGTTCTCAAAAGGTAAAACAAAAAATGTTCCAAAAGGGTCTCTGGGGTACCCTATCATCGGAGAGACCCTTAGTTTTCTTAAAGCACAGAGACAAGACAAGGGTTCTGAATGGTTGGAAGAACGGATATCTAAGTATGGTCCTGTCTTCAAAACCTCCTTAATGGGGTCCACCACAGTGTTTGCAATTGGACAAGCAGGAAACAAGTTTATCCTTGGTTCACCAGACGATGTGCTTTCTGCTAAGAAACCCATCACCCTGAAAAAGATATTTGGAAGACAAAGCTTAGTTGAACTCACAGGACACAGATACAAGTTAGTGAAGGGGGAAATGCTGAAATTCTTGAAACCCGAATGCCTTCAGAAGTATGTAAAAAAGATGGATGAATTGGTGAATGCTACATTACTGAGAGAAGTGACAGAGAAAGAAACAGTGGGAGTTGTGGTGTTGATGAAGAAACTGTCCTATGATTTATCATGCAATATATTGTTTGACATTAAGGATGAGCATACCAGGGAGGCTTTGTTTGTGGATTTCACTTTAGCATTTAAAGCAATTCATTCTCTTCCCATCAATTTCCCTGGTACCACATTTTGGAGAGGCCAAAGAGCCAGGGCAAGAATTGTTGACAGAATGATTCCTATTATGAACAAAAGATGGGAGGAACTGTCTAAAGGAGTCTTAAGTTCTACCAATGACATGATTTCTGGCTTGCTTGCACTGAGGGATGAAAATGATCAACCTCTACCACATGATTTAATTACAGACAATTTTATATTTTTACTTGTTGCTAGCCATGACACATCTGCCACTCTTATGAGCTTGATGATATGGAAGTTATCTAGAGATCCAGAAGTTTACAAAAAAGTTTTACAAGAACAAATGGAAATCATAAAGCAAAGGGAAGGAACAGAAGAGAGACTAACATGGGAAGAGATTCAAAAGATGAAATACACATGGAGACTGGCTCAGGAGCTGATGAGGATGATCCCTCCCTTGTTTGGCAGCTTTAGGAAAGCACTTAAAGATACTAGCTTTCAAGGATATGACATACTAAAAGGGTGGCAGGTGTATTGGGCAGCATATGGAACCCATATGAAGGATGATATATTTGAGAATCCAGAGAAGTTTGATCCATCTCGTTTTGAGAATCCAACAAAGCCAATTCCACCTTATTCTTACCTTCCATTTGGTGCAGGGATTCATTACTGCATAGGAAACGAGTTTGCAAGGATTGAGACCTTGACAACCATTCACAACTTTGTGAAACTGTTTGAATGGTCTCAAGTAAACCCAGAGGAACCAATTACCCGTCAACCAATGCCATATCCATCCTTGGGTCTCCCAATTAAGATCAAACCCAGATCTAATATGCCTTGA 1449 0.3982 MVMGISFFVLFSSTLSLAFLLSKWFSKGKTKNVPKGSLGYPIIGETLSFLKAQRQDKGSEWLEERISKYGPVFKTSLMGSTTVFAIGQAGNKFILGSPDDVLSAKKPITLKKIFGRQSLVELTGHRYKLVKGEMLKFLKPECLQKYVKKMDELVNATLLREVTEKETVGVVVLMKKLSYDLSCNILFDIKDEHTREALFVDFTLAFKAIHSLPINFPGTTFWRGQRARARIVDRMIPIMNKRWEELSKGVLSSTNDMISGLLALRDENDQPLPHDLITDNFIFLLVASHDTSATLMSLMIWKLSRDPEVYKKVLQEQMEIIKQREGTEERLTWEEIQKMKYTWRLAQELMRMIPPLFGSFRKALKDTSFQGYDILKGWQVYWAAYGTHMKDDIFENPEKFDPSRFENPTKPIPPYSYLPFGAGIHYCIGNEFARIETLTTIHNFVKLFEWSQVNPEEPITRQPMPYPSLGLPIKIKPRSNMP 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium947g00008 482 Pfam Cytochrome P450 34 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00008 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Vium947g00008 482 PANTHER CYTOCHROME P450 26 32 467 - -
Vium947g00008 482 FunFam Taxadiene 5-alpha hydroxylase 25 478 - -
Vium947g00008 482 CDD CYP90-like 65 477 - -
Vium947g00008 482 SUPERFAMILY Cytochrome P450 29 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00008 482 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00008 482 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00008 482 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00008 482 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00008 482 Gene3D Cytochrome P450 25 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00008 482 PRINTS E-class P450 group IV signature 411 427 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00008 482 PRINTS E-class P450 group IV signature 388 406 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00008 482 PRINTS E-class P450 group IV signature 427 445 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium947g00008 482 PRINTS E-class P450 group IV signature 60 83 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium947g00008 Vium-Chr947 125798 128154 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium947g00008 7 453 Cytochrome P450 AT4G19230 30.155 1.38e-63 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium947g00008 - - gmx:100790209 831.632