Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9463g00010 ATGGAAAAGATCAAGGATCCATCAATTTACCGCAATCCAGTCATATTACAGAGCGAGGATTTAACCAAGTATATATTGGAAACAGCTGTTTACCCTAGAGAACCTGAGCCCCTGAAGGAGCTGAGGGAACTCAATAAAGATCACCCTTGGGGCTTCATTGCTACTTCACCTGATGCTGCTCAGCTAATGGCCTTACTTTTAAAGGTGTTGAATCCCAGAAAGACCATTGAAGTGGGAGTGTTTACTGGTTACTCCCTTCTCCTCACTGCACTCAACATTCCTCATGATGGAAAGATTACAGCCATAGATATTAACAGGAAAGCTTATGACATTGGATTACCAGCCATAAAAAAGGCTGGAGTTGAGCACAAGATTGATTTCATAGAGTCTGCAGCTCTGCCAATTTTGGATAAACTACTTGAAGATCCTGCAAATGAAGGATCTTTTGACTTTGCTTTCGTTGATGCTGACAAAGATAACTATGTTAACTACCATGAGAGGCTTATAAAACTGATCAAGATCGGTGGTTTACTTGTATATGACAACACTCTGTGGGGAGGACGTGTTTGCTGGCCTGAAGAAAAAGTTCCAGAACACTTCAGATCAGGGAGGAATGCAGCAATTGAATTCAACAAGACAATCACAAACGATTCTCGCGTTGAATTTGCTCTTACTTCTGTAGGAGATGGTCTCAATATTTGTAGGCGCGTAGCTTGA 717 0.4156 MEKIKDPSIYRNPVILQSEDLTKYILETAVYPREPEPLKELRELNKDHPWGFIATSPDAAQLMALLLKVLNPRKTIEVGVFTGYSLLLTALNIPHDGKITAIDINRKAYDIGLPAIKKAGVEHKIDFIESAALPILDKLLEDPANEGSFDFAFVDADKDNYVNYHERLIKLIKIGGLLVYDNTLWGGRVCWPEEKVPEHFRSGRNAAIEFNKTITNDSRVEFALTSVGDGLNICRRVA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9463g00010 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Vium9463g00010 238 Pfam O-methyltransferase 28 237 IPR002935 GO:0008171
Vium9463g00010 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Vium9463g00010 238 CDD AdoMet_MTases 76 180 - -
Vium9463g00010 238 Gene3D Vaccinia Virus protein VP39 8 238 IPR029063 -
Vium9463g00010 238 PANTHER O-METHYLTRANSFERASE-RELATED 12 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9463g00010 Vium-Chr9463 20330 21950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9463g00010 15 237 Monolignol Biosynthesis Gene Families AT4G26220 63.677 4.41e-105 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9463g00010 K00588 - gmx:100800911 422.165