Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9454g00001 ATGGCACTTTTGCCATATTCAGGATGCATTGTTCTTTGTGCAACCATTTTTCTCTTCTTCACGTTATCATCATCAATGTCTCAAGCACAGCTTGATGCTCATTACTACGATAAAACATGTCCACAGGCAGAGAACATCATTTCAGACACTGTTCTCAGTGCTTCCAAATTTGACCCAAAAGTCCCAGCTCGGATCTTGAGGATGTTCTTCCATGATTGTTTCATAAGGGGCTGTGATGCATCGATATTGCTGGACTCAACTCCCAAAAACCTGGCTGAGAAAGATGGTCCACCTAATCTCTCTGTTCATTCATTCTATGTTATTGATGAAGCCAAGACCAAGCTTGAGAAAGCTTGTCCACACACTGTTTCTTGTGCTGATATAATCGCCATTGCAGCTAGAGATGTGGTGGCACAGTCTGGAGGACCATCTTGGAATGTGCTAAAAGGAAGAAAAGATGGAAGGGTGTCGAAGGCGTCAGAAACAGTCAACTTGCCAGCTCCAACCTTAAATGTGAATCAACTCATTCAGAGTTTTGCAAAGAGAGGTTTAGGAGTGAATGATATGGTGACTCTCTCCGGTGGCCACACTCTTGGATTTTCGCACTGTTCTTCTTTCCAAGCAAGAGTTCATAACTTCAGTTTGTTGCATGCTATTGACCCTAGTTTGAACACTGAGTTTGCTCTAGACCTGATAAGGAAGTGTCCAAAAGTAAACACAAACCCCAATGCTGGACACGTCCTGGACTCAACATCATCGGTGTTTGACAATGATTACTATAGACAGTTGTTGGTGGGAAAGGGTTTGTTCTCATCAGATGAGTCTCTT 828 0.43 MALLPYSGCIVLCATIFLFFTLSSSMSQAQLDAHYYDKTCPQAENIISDTVLSASKFDPKVPARILRMFFHDCFIRGCDASILLDSTPKNLAEKDGPPNLSVHSFYVIDEAKTKLEKACPHTVSCADIIAIAARDVVAQSGGPSWNVLKGRKDGRVSKASETVNLPAPTLNVNQLIQSFAKRGLGVNDMVTLSGGHTLGFSHCSSFQARVHNFSLLHAIDPSLNTEFALDLIRKCPKVNTNPNAGHVLDSTSSVFDNDYYRQLLVGKGLFSSDESL 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9454g00001 276 PANTHER PEROXIDASE 25-RELATED 18 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 FunFam Peroxidase 34 175 - -
Vium9454g00001 276 CDD secretory_peroxidase 30 276 IPR033905 GO:0004601|GO:0042744
Vium9454g00001 276 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Vium9454g00001 276 Gene3D - 34 165 - -
Vium9454g00001 276 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 PRINTS Plant peroxidase signature 262 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 ProSiteProfiles Plant heme peroxidase family profile. 30 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 Pfam Peroxidase 54 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 SUPERFAMILY Heme-dependent peroxidases 30 276 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium9454g00001 276 FunFam Peroxidase 166 276 - -
Vium9454g00001 276 Gene3D Peroxidase, domain 2 166 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9454g00001 Vium-Chr9454 7 2013 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9454g00001 27 276 Peroxidase AT5G51890 72.510 1.07e-136 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9454g00001 K00430 - gmx:100795422 466.463