Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium943g00002 ATGGCTTTTCCTCCACACATAGTAGAAGACTGCATGGGCCTCCTCAAACTCTTCAGTGATGGCACCGTTTTTCGTTCCAATATTCAGTTCCAAGAACAACCCTCATCCACCCAACAACACAACAACCTCGTACTCTTCAAAGATTACATCTTTCACAAGAAATTTAACCTCCACCTCCGTCTCTACAAACCTAAACTCGATAACGACGATAATGGTGCTGAGAGCAAGGAGAAGCTACCGGTGCTAATGTTCCTCCATGGTGGGGGCTTCTGCTTCGGGTCGCACGCGTGGCCGCACATTCATGCATGTTGTGTACGTCTCGCCGTGGATCTCCGTGCGGTTGTGGTGGCGCCGGACTATCGTCTGGCACCGGAGCACCGCCTTCCCGCAGCGGTGGACGATTGCGTGGAGGCTGTGCGGTGGCTGCAGAGGCAGGGACGTGGCGGGGACTCGTGGGTGAGCCGCGTTGACTTTGAGCGCGTCTTTGTGTTTGGCGACTCGTCTGGCGGGAACATTGCGCACCACTTGGCGGTTCAGCTCGGATCCGGTTCGAGAGAGATGGACCCGGTTCGAGTACGAGGTTACGTGATGATGGGCCCATTTTTCGGTGGGGTGGTTCGGACCAAGTCTGAGGTGGGCCCTCCGGAAGAAATGCTGACACTTGATTTGCTGGACAGATTTTGGAGATTGTCTATACCTATTGGAGAGAATAGAGATCATCCATTGGCAAACCCCTTTGGCCCTAACAGTCAGAATCTTGCAGACGTGAAGCTTGATCCTATCTTAGTGATAGTTGGTGGCAATGAATTGCTGAAGGACAGAGCAAAAGACTATGCAACAAGGTTAAAGGAACTAGGGAAGAACATTGAATACATTGAGTTCAAGGACAAGGAACATGGTTTTCTCACTCATGATTCATCCTCACAAGTTGTCCAAGACCTTCTGCAAATCATCAAACACTTCATGCTTCAAAATTCTAGTTAG 984 0.5061 MAFPPHIVEDCMGLLKLFSDGTVFRSNIQFQEQPSSTQQHNNLVLFKDYIFHKKFNLHLRLYKPKLDNDDNGAESKEKLPVLMFLHGGGFCFGSHAWPHIHACCVRLAVDLRAVVVAPDYRLAPEHRLPAAVDDCVEAVRWLQRQGRGGDSWVSRVDFERVFVFGDSSGGNIAHHLAVQLGSGSREMDPVRVRGYVMMGPFFGGVVRTKSEVGPPEEMLTLDLLDRFWRLSIPIGENRDHPLANPFGPNSQNLADVKLDPILVIVGGNELLKDRAKDYATRLKELGKNIEYIEFKDKEHGFLTHDSSSQVVQDLLQIIKHFMLQNSS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium943g00002 327 Coils Coil 268 288 - -
Vium943g00002 327 PANTHER ARYLACETAMIDE DEACETYLASE 15 302 - -
Vium943g00002 327 Pfam alpha/beta hydrolase fold 82 302 IPR013094 GO:0016787
Vium943g00002 327 Gene3D alpha/beta hydrolase 14 326 IPR029058 -
Vium943g00002 327 SUPERFAMILY alpha/beta-Hydrolases 5 321 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium943g00002 Vium-Chr943 52251 55129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium943g00002 7 322 Carbohydrate Esterase AT5G16080 36.061 1.31e-59 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium943g00002 - - gmx:100801473 532.717