Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9435g00004 ATGGATGATTTAAACAAAGTTGAAGGCACAGGTAATGTGAAGGCTGTACTGTTAATGATACTGCTCCAGACTCTATATGCAGTGGTGAATATCATGTTAAAGATAGTAGCAGATGATGGAATGAGCTTAAGTATTCTTATTGCCTACCGATTCATCTTTGCTAGTGCCTTCATTGTTCCCCTAGCTCTCATCGTTGAAAGGTGCTGGAATATGGATGATTTAAACAAAGTTGAAGGCACAGGTAATGTGAAGGCTGTACTGTTAATGATACTGCTCCAGACTCTATATGCAGTGGTGAATATCATGTTAAAGATAGTAGCAGATGATGGAATGAGCTTAAGTATTCTTATTGCCTACCGATTCATCTTTGCTAGTGCCTTCATTGTTCCCCTAGCTCTCATCGTTGAAAGGAAACATCTGCAAGATGTTACTGGGAAAGTTGCATTCCAAGGTTTTCTCTGTGGGTTATTTGGGGGATCCTTACTACAAGGTCTCTACGTTAAATCGTTGGCCTTGACGTCTGCAGTATATGTTTCAGCCATGATGAATCTCGTCCCTGGTGTCACCTACCTTATGTCTATTTCTCTCGGGTGTCGAGGAAGAAATATTGTGTGGTTGGTGAGGCAATGTCCAATGATCAATGCTCGTCTTGCTCATGGGGGACCTCACGTGTGGTTCATTAGAGGAATGGTTGCAGCCAAATATGCTACTGTGGAGAGCTTGCCGTATTAA 732 0.4208 MDDLNKVEGTGNVKAVLLMILLQTLYAVVNIMLKIVADDGMSLSILIAYRFIFASAFIVPLALIVERCWNMDDLNKVEGTGNVKAVLLMILLQTLYAVVNIMLKIVADDGMSLSILIAYRFIFASAFIVPLALIVERKHLQDVTGKVAFQGFLCGLFGGSLLQGLYVKSLALTSAVYVSAMMNLVPGVTYLMSISLGCRGRNIVWLVRQCPMINARLAHGGPHVWFIRGMVAAKYATVESLPY 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9435g00004 243 SUPERFAMILY Multidrug resistance efflux transporter EmrE 119 194 - -
Vium9435g00004 243 PANTHER WAT1-RELATED PROTEIN 85 196 IPR030184 GO:0016020|GO:0022857
Vium9435g00004 243 Pfam EamA-like transporter family 84 194 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9435g00004 Vium-Chr9435 21392 26002 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9435g00004 12 67 Nodulin-like Gene Family AT3G56620 46.429 1.45e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9435g00004 - - vum:124848458 453.366