Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9410g00007 ATGGCTGTAGCCAGATTTTCCATGGAGGTGTCTAGACGATCACGGTGTCAAGGTCTACAAATCCAACCATCAATTTCTGTTTTAGAGCAATTCTTTTTTCTGGCTCTTGGTGAATATAGAGTTCTAAGAACTCTGTCCGTTTCAATTTTGGTACCTCGTAGGTCCATTTGCGAATTTTTTGCGTTTCAAGCGACTGGCGAGACGTTTCTGTGGGTTGAGGCTGTTTCTTGTAAGGAGGTGTCTAGACGATCACGGTGTCAAGGTCTACAAATCCAACCATCAATTTCTGTTTTAGAGCAATTCTCTTTTCTGGCTCTTGGTGAATATAGAGTTCTAAGAACTCTGTCCGTTTCAATTTTGGTACCTCGTAGGTCCATTTGCGAATTTTTTGCGTTTCAAGCGACTGGCGAGACGTTTCTGTGGGTTGAGGCTGTTTCTTGTTTTGTTGAAACGAAACAGATCCTGGCAATGGATATTAGCAGGGAATATTATGAACTGGGGTTGCCTGTGATTGAAAAGGCAGGAGTGGCTCACAAGATTGACTTCAGAGAAGGTCCAGCACTTCCTCTTCTTGATCAACTCATCAAAGACGAAAATAACAAGGGAAGCTTCGATTTCATCTTCGTCGATGCTGATAAGGATAACTACTTGAACTATCACAATAGGGTGATTGAGCTTGTCAAGATTGGGGGAATGATCGCCTACGATAACACCCTGTGGAACGGCTCTGTGGCCGCCCCATCCGATGCTCCTCTCTTGGATTATATTAAGTATTATCGCGATTTTGTGATAGAGCTGAATCAAGCACTTGCACTTGATTCAAGGGTCGAGATTTGCCAGCTTCCCGTTGGTGACGGCATTACACTGTGCCGCCGCATCATCTGA 885 0.4418 MAVARFSMEVSRRSRCQGLQIQPSISVLEQFFFLALGEYRVLRTLSVSILVPRRSICEFFAFQATGETFLWVEAVSCKEVSRRSRCQGLQIQPSISVLEQFSFLALGEYRVLRTLSVSILVPRRSICEFFAFQATGETFLWVEAVSCFVETKQILAMDISREYYELGLPVIEKAGVAHKIDFREGPALPLLDQLIKDENNKGSFDFIFVDADKDNYLNYHNRVIELVKIGGMIAYDNTLWNGSVAAPSDAPLLDYIKYYRDFVIELNQALALDSRVEICQLPVGDGITLCRRII 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9410g00007 294 Gene3D Vaccinia Virus protein VP39 116 294 IPR029063 -
Vium9410g00007 294 PANTHER O-METHYLTRANSFERASE-RELATED 153 293 - -
Vium9410g00007 294 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 61 293 IPR002935 GO:0008171
Vium9410g00007 294 Pfam O-methyltransferase 150 293 IPR002935 GO:0008171
Vium9410g00007 294 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 152 292 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9410g00007 Vium-Chr9410 42662 59587 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9410g00007 150 293 Monolignol Biosynthesis Gene Families AT4G34050 75.000 1.22e-82 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9410g00007 K00588 - gmx:100795858 266.544