Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9410g00006 ATGATGTTATCAGCTACAATGTCTGCTCTATCGAGGAGTTCGCTGGAGGAGATGCTTGAGTCGCTTCGCAAGAGAGACGAGGAGGAGAGACCGAAGGACTTGCCGCCGGCATTGCCGTCGCGGCCGCAGTCGAGGGCGCGGTTGCCTCCGGCGAGGAGGTCGTTGCCTCATAACTTCAAGGTTGATGGCGATAATGATCAGAAGGGGCACAAAAGGAAGGGTAGTTTTGGGTCCAAGAAGGTCAAGTTGCGTGTGGAATCCCCTTATGCAGTCATATCAGAAGAGAAAGTGAGTGAACAACCATCGTCTCCGGTTCCAACTGCGAATGATTCTTCTACTGATTGTGAAGCTCCTCCTCAGTCTGAGGAGTTGGAGGATGATAACGTTGCTTATTTCATAAAAAAGAAACTTCATGTTTGGTGTAGGCAACCAAGAGGGAAATGGGAGCTGGGAACGATACAGTCAACTTCTGGAGAGGAAGCATCTGTTTATCTCTCAAATGGAAATGTTTTGAAAGTAGCCAGGTCAGATCTCCTACCAGCTAATCCTGACATTTTTGAGGGTATTGAAGATCTTATACAGCTCAGTTACTTAAATGAGCCTTCAGTTCTTCACAATCTTCAGTATAGATATGCTCAGGATATGATTTATAGTAAAGCAGGGCCAATTTTAATTGCACTCAATCCTTTCAAAAATGTCGAAGTTTATGGCAATGATTATGTTCTAGCTTATAGGCAGAAACTTACCGATAGTCCTCATGTTTATGCTTTGACAGATGCAGCTTACAATGAGATGATGACAGGTGAAGTAAATCAGTCTATTATCATAAGTGGTGAAAGTGGAGCTGGGAAAACAGAGACCGCAAAAATTGCTATGCAATACTTAGCTGCTCTTGGTGGTGGCTGTTCAGGAATAGAAAATGAAATCCTTCAGACAAATTTTATTCTAGAGGCTTTTGGGAATGCAAAAACATCTAGGAATGATAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCACAATGGGGAAAATTTGTGGTGCAAAAGTTCAAACTTTTCTGTTAGAAAAGTCAAGAGTTGTTCAACTTGCCTTGGGTGAGAGGTCATATCACATATTTTATCAACTTTGTGCGGGATCTTCATCCAAACTAAAAGAAAGACTGAATCTTAGGGCGGCTAGCGAATATAAATATCTTAACCAAAGTGACTGCACAACAATTGATGGTGTTGATGATGCTAAAAAGTTTAAAAGGCTGATGAAAGCTTTGGATGTTATTCAAATGTGCAAAGAAGATCAAGAGCTAGTTTTTAAGATGCTGGCTGCGATATTATGGTTGGGAAATATAGCATTCCAAGATAGTGATAATGAAAATCACATTGAGGTGGTGAATGATGAAGCTGTAACGAATGCTGCTGTGCTAATGGGGTGCAGTTCTCAGGAGCTAATGACAGTGTTATCTACCCATAAAATCCAAGCTGGCAAGGATACTATTACCAAGAAATTGACCTTGCGGCAGGCAATTGATGCAAGAGATGCAATAGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTTCAAGTAGGTAAACGGTGTACTGGGAGATCTATAAGTATCCTTGATATTTATGGATTTGAGTCATTCCAGAATAACAGCTTTGAACAATTTTGTATAAACTACGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTATGAATTAGACGGTATTGATTGGACTAGAGTAGAGTTTGAGGACAACCAAGTGTGTTTGGATCTCTTTGAAAAGAAGCCTCTTGGGCTATTCTCTCTGTTGGACGAGGAATCTAATTTCCCCAAGGCCAGTGATCTAACACTAGCCAACAAACTTAAGCAGCACCTGCACTCTAATCCTTGCTTTAAAGGGGAAAGAGGCAGGGCTTTTAGTGTCTCTCATTATGCTGGGGAGGTTTTGTATGATACAAGTGGCTTCCTAGAAAAGAATAGAGATCCACTACCATCTGATTCCATTCAACTACTGTCATCATGTAGCTGTGAACTGCTTCAGTTGTTCCCCAAGATGCTTAATCTGCCTCAGAAGCAATCAAATTACTCGCATGGAGGTGCTCTGGACTCAAAAAAGCAGAGTGTTGGCACTAAGTTCAAGGGTCAATTGTTCAAGTTGATGCATCAGCTGGAGAGCACCACACCTCACTTTATTCGCTGTATAAAGCCAAATACTAAGCAACTTCCTGGAATATATGAACAAGATCTTGTACTACAACAGCTCAAGTGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCGAGGGCTGGATATCCTACTCGAATGACACATCAAGATTTTTCCAGAAGGTATGGGTTTCTGCTTGTTGAGGCGAACACATCTCAGGACCCATTGAGCATTTCGGTTGCGGTTTTGCAACAATTTAATATCCCTCCCGAAATGTACCAAGTTGGCTTCACCAAACTTTATCTTCGAACTGGGCAGATTGGGGCACTGGAGGACAGGAGAAAATATCTTTTGCAGGGACTACTTGGTATTCAAAAAAGTTTTCGTGGTTATCAAGCTCGCCGTCGTTACCATGAGCTGAAGAAGGGAGTGACTACTTTACAATCATGTAATGTCTGGATATCAATACTAGTTTTGTTTGAGTTGGACGTTCTTATTTTATTCTATCTTTCATACACACTTTTCTTTATTTTTATGCTCATTTTTAAGTAA 2778 0.4107 MMLSATMSALSRSSLEEMLESLRKRDEEERPKDLPPALPSRPQSRARLPPARRSLPHNFKVDGDNDQKGHKRKGSFGSKKVKLRVESPYAVISEEKVSEQPSSPVPTANDSSTDCEAPPQSEELEDDNVAYFIKKKLHVWCRQPRGKWELGTIQSTSGEEASVYLSNGNVLKVARSDLLPANPDIFEGIEDLIQLSYLNEPSVLHNLQYRYAQDMIYSKAGPILIALNPFKNVEVYGNDYVLAYRQKLTDSPHVYALTDAAYNEMMTGEVNQSIIISGESGAGKTETAKIAMQYLAALGGGCSGIENEILQTNFILEAFGNAKTSRNDNSSRFGKLIEIHFSTMGKICGAKVQTFLLEKSRVVQLALGERSYHIFYQLCAGSSSKLKERLNLRAASEYKYLNQSDCTTIDGVDDAKKFKRLMKALDVIQMCKEDQELVFKMLAAILWLGNIAFQDSDNENHIEVVNDEAVTNAAVLMGCSSQELMTVLSTHKIQAGKDTITKKLTLRQAIDARDAIAKFIYASLFDWLVEQVNKSLQVGKRCTGRSISILDIYGFESFQNNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGIDWTRVEFEDNQVCLDLFEKKPLGLFSLLDEESNFPKASDLTLANKLKQHLHSNPCFKGERGRAFSVSHYAGEVLYDTSGFLEKNRDPLPSDSIQLLSSCSCELLQLFPKMLNLPQKQSNYSHGGALDSKKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNTKQLPGIYEQDLVLQQLKCCGVLEVVRISRAGYPTRMTHQDFSRRYGFLLVEANTSQDPLSISVAVLQQFNIPPEMYQVGFTKLYLRTGQIGALEDRRKYLLQGLLGIQKSFRGYQARRRYHELKKGVTTLQSCNVWISILVLFELDVLILFYLSYTLFFIFMLIFK 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9410g00006 925 PANTHER MYOSIN 180 890 - -
Vium9410g00006 925 MobiDBLite consensus disorder prediction 1 15 - -
Vium9410g00006 925 MobiDBLite consensus disorder prediction 1 79 - -
Vium9410g00006 925 FunFam Unconventional myosin-XIX 558 747 - -
Vium9410g00006 925 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 134 183 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vium9410g00006 925 ProSiteProfiles Myosin motor domain profile. 187 857 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vium9410g00006 925 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 892 IPR027417 -
Vium9410g00006 925 CDD MYSc_Myo8 201 845 IPR036022 -
Vium9410g00006 925 SMART MYSc_2a 181 858 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vium9410g00006 925 ProSiteProfiles IQ motif profile. 859 888 IPR000048 GO:0005515
Vium9410g00006 925 MobiDBLite consensus disorder prediction 17 35 - -
Vium9410g00006 925 Gene3D - 370 426 - -
Vium9410g00006 925 PRINTS Myosin heavy chain signature 314 341 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vium9410g00006 925 PRINTS Myosin heavy chain signature 271 296 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vium9410g00006 925 PRINTS Myosin heavy chain signature 546 574 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vium9410g00006 925 PRINTS Myosin heavy chain signature 217 236 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vium9410g00006 925 PRINTS Myosin heavy chain signature 599 627 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vium9410g00006 925 MobiDBLite consensus disorder prediction 57 72 - -
Vium9410g00006 925 FunFam Myosin IE heavy chain 427 535 - -
Vium9410g00006 925 Gene3D - 791 858 - -
Vium9410g00006 925 Gene3D Kinesin motor domain 186 790 IPR036961 -
Vium9410g00006 925 Pfam Myosin head (motor domain) 190 845 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vium9410g00006 925 MobiDBLite consensus disorder prediction 96 118 - -
Vium9410g00006 925 Gene3D Myosin VI head, motor domain, U50 subdomain 427 535 - -
Vium9410g00006 925 Gene3D - 558 747 - -
Vium9410g00006 925 Gene3D - 864 893 - -
Vium9410g00006 925 FunFam Myosin heavy chain 370 426 - -
Vium9410g00006 925 MobiDBLite consensus disorder prediction 92 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9410g00006 Vium-Chr9410 27279 35208 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9410g00006 1 891 Myosins gene family AT5G54280 68.113 0.0 1288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9410g00006 K10357 - gmx:100801876 1558.12