Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium940g00017 ATGGAGAGCACAAAAGTCGAATCCTACTTTGTTTTCATGAGCTATGATCCTGAATACGAGAGACTTAGAACTCTTGGAACCAAGAGAGGGGCACACGAGCTTGATTTGTACCTTAGTACAAAACACGATGAGCTCTTAGCAAGTACTCTAGAGCCAGGAACCTACAAGAAGACATCTTCTTTGGTCATTGTTGATGGTTTTGCAGTAGAAATTACCCAGGATCAGCAGGCTAATGTGCTCAGATCTGCAAAAGGGGTGAGGGTTGTGGAGAAAAATGAAGAGCTGGTCTAA 291 0.433 MESTKVESYFVFMSYDPEYERLRTLGTKRGAHELDLYLSTKHDELLASTLEPGTYKKTSSLVIVDGFAVEITQDQQANVLRSAKGVRVVEKNEELV 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium940g00017 96 PANTHER OS01G0220500 PROTEIN 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium940g00017 Vium-Chr940 113405 114236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium940g00017 37 92 Subtilisin-like Serine Gene Family AT2G19170 42.105 4.62e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium940g00017 - - aprc:113855755 153.68