Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9385g00001 ATGTACAATGAATGTCACGAGAGCATAACCTCTCTCAACAGAGTTCCTAGAACCTGTTATATTGAGTCTGAGAACAAGGTCTTGCCTGTTTATTCTTTGGAGGCTGAGTTTGCAAGGCCGCTGTGGATTTTTGGCATGAATTCTTATGAATTTCTTCAAGGTCATATACAAAAAAACTTAATTGCTTGCACTTACAGACAGCAGGGGAAGTCATATCTTGGAATTATTGATGATGATCCAGACTCAAAGCTAACTCTGCTGGATATCCCTTTCACAGATATAGATAACATTACTTCTGGTAATGATTGCCTCTATGTGGAGGGAGCGTCTGCTGTTTCTTCATCATCAGTGGCCAAGGTGACTTTAGATAATGATAAATCTAAAGCAGTTGACTTCAACATTATTTGGTCCTCCTCCCCAGATAGTTTGAAGTATACTTCTTACTTTAGTAAACCTGAGTTGATTGAATTCCCAACTGAAGTTCCTGGTCAAAATGCTTATGCATACTTTTACAAACCATGTAATCCTGATTTCCAAGCTAGTGCAGAAGAAAAGCCTCCATTATTATTGAAGAGCCATGGAGGACCAACCGCTGAAGCGCGTGGAATTTTAAATTTGAGCATTCAGTACTGGACTAGTAGGGGTTGGGCTTTTGTTGATGTTAATTATGGTGGAAGCACTGGTTATGGCAGGGAGTTTCGCGAACGGCTTTTGGGACGTTGGGGAATAGTTGATGTCAATGACTGTTGTAGTTGTGCTACATACTTGGTTAACAGTGGAAAGGTAGATGGGAAGCGGCTTTGTATTACAGGGGGCTCTGCTGGTGGGTATACCACCTTAGCAGCTCTTGCTTTTAAAGAAACTTTTAAGGCCGGTGCTTCTTTGTATGGTGTAGCTGACGTGAACTTGTTGAGAGCGGAAACTCATAAATTTGAATCTCATTATATCGATAGACTGGGTGGAGGTGAGAAAGGGTGCTATGAAAGATCACCAATCAATCATGTTGACAAATTTTCTTGTCCCATAATTTTATTTCAGGGGTTGGAGGACAAGGTTGTACCACCAGAACAAGCTCGAAAAATTTACCAGGCTCTAAAGGAAAAAGGTGTGCCAGTTGCTCTTGTTGAGTATGAAGGAGAACAACATGGTTTCCGAAAGGCTGAGAACATTAAGTTTACACTTGAACAACAAATGGTCTTCTTTGCACGATTGGTTGGACACTTCAATGTTGCTGATGATATTACTCCCATCAAAATTGACAACTTTGATTGA 1272 0.4064 MYNECHESITSLNRVPRTCYIESENKVLPVYSLEAEFARPLWIFGMNSYEFLQGHIQKNLIACTYRQQGKSYLGIIDDDPDSKLTLLDIPFTDIDNITSGNDCLYVEGASAVSSSSVAKVTLDNDKSKAVDFNIIWSSSPDSLKYTSYFSKPELIEFPTEVPGQNAYAYFYKPCNPDFQASAEEKPPLLLKSHGGPTAEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATYLVNSGKVDGKRLCITGGSAGGYTTLAALAFKETFKAGASLYGVADVNLLRAETHKFESHYIDRLGGGEKGCYERSPINHVDKFSCPIILFQGLEDKVVPPEQARKIYQALKEKGVPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARLVGHFNVADDITPIKIDNFD 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9385g00001 423 Pfam Prolyl oligopeptidase family 207 406 IPR001375 GO:0006508|GO:0008236
Vium9385g00001 423 Gene3D alpha/beta hydrolase 144 412 IPR029058 -
Vium9385g00001 423 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 17 418 - -
Vium9385g00001 423 SUPERFAMILY alpha/beta-Hydrolases 138 421 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9385g00001 Vium-Chr9385 1279 26039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium9385g00001 20 423 Carbohydrate Esterase AT5G36210 76.485 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9385g00001 - - vum:124848396 866.685