Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9381g00010 ATGCGGTCATTTCCTCTGGGAACTTCACTATCTCCTACTCCTATAAACACCTCAAAAATATCACCTTTCAACATTAATTTCAAGAAATCACCCACTTTTCCATATTGGGGTTCAACTTCTCCTCACGAATTCTCTCTCTCACAATCAGGAACATGTAGAGCAAGTCAAGTAGCTGATTTGTTCCCAACTGTGTCTCCTGAAATCATTGTGCGTGAGGCCAGGTTGGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCCGAATATTCCTTCCCACTAGATTTTGTGCTGAGGATGGACAGATTGGTGGCCATGTTGGCAGGATTTACATTACCAAACGGTTGCAAGAGAACCTGTTTGGTTGCTGTTATTGGCAACTCACTTTGTGAAACTTTCTTGTTTGGAAGTGATGATTTCAAGGTTGGTGGTTTTGATGGGAAATTCAGCCTCAACAAGGGGTATGTGGCTGGTATATTAACAGTAGATACTGTTGCTGACTTTCTACCTAGGAAGGGGCCTTTGCGACAGAAAAGGACTGGAATTGCATACATATCAAATGTGGCAGTCCGGGAAAAATTTAGGCGAAAGGGAATAGCTAAACTCTTGGTAGCAAAGGCAGAATCACAAGCCAGAAGCTGGGGCTGTCGTGCAATTGCATTACACTGTGATTTCAAAAATCCTGCTGCCACAAAGTTATATCAAGGCCAAGGTTTCAGGTGTATCAAGGTTCCAGAAGGAGCTAACTGGCCACAGCCAAAGACCTCACCAGATATAAAGTTCAACTTCATGATGAAGCTTCTCAACAACTAA 822 0.4367 MRSFPLGTSLSPTPINTSKISPFNINFKKSPTFPYWGSTSPHEFSLSQSGTCRASQVADLFPTVSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVAMLAGFTLPNGCKRTCLVAVIGNSLCETFLFGSDDFKVGGFDGKFSLNKGYVAGILTVDTVADFLPRKGPLRQKRTGIAYISNVAVREKFRRKGIAKLLVAKAESQARSWGCRAIALHCDFKNPAATKLYQGQGFRCIKVPEGANWPQPKTSPDIKFNFMMKLLNN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9381g00010 273 CDD NAT_SF 184 225 - -
Vium9381g00010 273 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 68 273 IPR000182 GO:0016747
Vium9381g00010 273 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 273 - -
Vium9381g00010 273 Gene3D - 68 252 - -
Vium9381g00010 273 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 67 249 IPR016181 -
Vium9381g00010 273 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 68 269 - -
Vium9381g00010 273 Pfam Acetyltransferase (GNAT) family 158 242 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9381g00010 Vium-Chr9381 69913 74653 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium9381g00010 Acetyltransf_1 2.5e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9381g00010 - - gmx:100305894 516.153