Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium9381g00008 CGTTTGGATGTAGGAACATGTAGAGCAAGTCAAGTAGCTGATTTGTTCCCAACTGTGTCTCCTGAAATCATTGTGCGTGAGGCCAGGTTGGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCCGAATATTCCTTCCCACTAGATTTTGTGCTGAGGATGGACAGATTGGTGGCCATGTTGGCAGGATTTACATTACCAAACGGTTGCAAGAGAACCTGTTTGGTTGCTGTTATTGGCAACTCACTTGGTGAAACTTTCTTGTTTGGAAGTGATGATTTCAAGGTCGGTGGTTTTGATGGGAAATTCAGCCTCAACAAGGGGTATGTGGCTGGTATATTAACAGTAGATACTGTTGCTGACTTTCTACCTAGGAAGGGGCCTTTGCGACAGAAAAGGACTGGAATTGCATACATATCAAATGTGGCAGTCCGGGAAAAATTTAGGCGAAAGGGAATAGCTAAACTCTTGGTAGCAAAGGCAGAATCACAAGCCAGAAGCTGGGGCTGTCGTGCAATTGCATTACACTGTGATTTCAAAAATCCTGCTGCCACAAAGTTATATCAAGGCCAAGGTTTCAGGTGTATCAAGGTTCCAGAAGGAGCTAACTGGCCACAGCCAAAGACCTCACCAGATATAAAGTTCAACTTCATGATGAAGCTTCTCAACAACTAA 687 0.4498 RLDVGTCRASQVADLFPTVSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVAMLAGFTLPNGCKRTCLVAVIGNSLGETFLFGSDDFKVGGFDGKFSLNKGYVAGILTVDTVADFLPRKGPLRQKRTGIAYISNVAVREKFRRKGIAKLLVAKAESQARSWGCRAIALHCDFKNPAATKLYQGQGFRCIKVPEGANWPQPKTSPDIKFNFMMKLLNN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium9381g00008 228 Pfam Acetyltransferase (GNAT) family 113 197 IPR000182 GO:0016747
Vium9381g00008 228 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 23 224 - -
Vium9381g00008 228 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 17 202 IPR016181 -
Vium9381g00008 228 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 228 IPR000182 GO:0016747
Vium9381g00008 228 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 5 228 - -
Vium9381g00008 228 CDD NAT_SF 139 180 - -
Vium9381g00008 228 Gene3D - 21 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium9381g00008 Vium-Chr9381 63496 64755 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium9381g00008 Acetyltransf_1 1.6e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium9381g00008 - - vum:124848387 468.388